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Searching for up to 100 curated homologs for 18151 FitnessBrowser__Keio:18151 (446 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

Removed hits that are identical to the query, leaving 3

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

dcuB / CAA10331.1 C4-dicarboxylate membrane transporter from Wolinella succinogenes (see paper)
    71% identity, 100% coverage of query (624 bits)

fraA / Q8ZLD2 N-(1-deoxy-D-fructos-1-yl)-L-aspartate transporter from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
TC 2.A.13.1.3 / Q8ZLD2 C4-dicarboxylate transporter, YhiT from Salmonella typhimurium (see paper)
    39% identity, 99% coverage of query (293 bits)

GenA / b4138 C4-dicarboxylate transporter DcuA from Escherichia coli K-12 substr. MG1655 (see 9 papers)
dcuA / P0ABN5 C4-dicarboxylate transporter DcuA from Escherichia coli (strain K12) (see 12 papers)
DCUA_ECOLI / P0ABN5 C4-dicarboxylate transporter DcuA from Escherichia coli (strain K12) (see 7 papers)
TC 2.A.13.1.1 / P0ABN5 Anaerobic C4-dicarboxylate antiporter (aspartate:fumarate antiporter) from Escherichia coli (see 10 papers)
    36% identity, 99% coverage of query (267 bits)

Build an alignment

Build an alignment for 18151 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory