Sites on a Tree

 

Searching for up to 100 curated homologs for 18212 FitnessBrowser__Keio:18212 (541 a.a.)

Found high-coverage hits (≥70%) to 7 curated proteins.

Removed hits that are identical to the query, leaving 5

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

5ez3B / Q8YC61 Crystal structure acyl-coa dehydrogenase from brucella melitensis in complex with fad
    45% identity, 95% coverage of query (419 bits)

4y9jB / Q9XWZ2 Crystal structure of caenorhabditis elegans acdh-11 in complex with c11-coa (see paper)
    30% identity, 90% coverage of query (191 bits)

ACD11_CAEEL / Q9XWZ2 Acyl-CoA dehydrogenase family member 11; EC 1.3.99.- from Caenorhabditis elegans (see paper)
    30% identity, 90% coverage of query (191 bits)

6sd8X / Q6MJ59 Bd2924 apo-form (see paper)
    31% identity, 71% coverage of query (174 bits)

6sdaB Bd2924 c10 acyl-coenzymea bound form
    31% identity, 71% coverage of query (174 bits)

Build an alignment

Build an alignment for 18212 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory