Searching for up to 100 curated homologs for 18290 FitnessBrowser__Keio:18290 (439 a.a.)
Found high-coverage hits (≥70%) to 11 curated proteins.
Removed hits that are identical to the query, leaving 10
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
YhgC / b3415 high-affinity gluconate transporter from Escherichia coli K-12 substr. MG1655 (see 5 papers)
gntT / P39835 high-affinity gluconate transporter from Escherichia coli (strain K12) (see 4 papers)
GNTT_ECOLI / P39835 High-affinity gluconate transporter; Gluconate permease; Gnt-I system from Escherichia coli (strain K12) (see paper)
TC 2.A.8.1.4 / P39835 D-Gluconate:H+ symporter, GntT from Escherichia coli (see 9 papers)
62% identity, 100% coverage of query (532 bits)
TC 2.A.8.1.1 / P12012 D-Gluconate:H+ symporter of 448 aas and 11 TMSs from Bacillus subtilis (see 3 papers)
50% identity, 97% coverage of query (429 bits)
YjhF / b4296 KpLE2 phage-like element; putative transporter YjhF from Escherichia coli K-12 substr. MG1655 (see 4 papers)
49% identity, 100% coverage of query (375 bits)
RR42_RS28835 gluconate:H+ symporter (gntT) from Cupriavidus basilensis FW507-4G11
46% identity, 94% coverage of query (360 bits)
BPHYT_RS16725 gluconate:H+ symporter (gntT) from Burkholderia phytofirmans PsJN
44% identity, 95% coverage of query (350 bits)
YjiB / b4321 fructuronate transporter from Escherichia coli K-12 substr. MG1655 (see 6 papers)
gntP / P0AC94 fructuronate transporter from Escherichia coli (strain K12) (see 6 papers)
TC 2.A.8.1.3 / P0AC94 D-Fructuronate/D-gluconate:H+ symporter, GntP from Escherichia coli (see 5 papers)
40% identity, 98% coverage of query (336 bits)
GntU / b4476 low-affinity gluconate transporter from Escherichia coli K-12 substr. MG1655 (see 4 papers)
gntU / P0AC96 low-affinity gluconate transporter from Escherichia coli (strain K12) (see 4 papers)
TC 2.A.8.1.8 / P0AC96 Low-affinity (212 from Escherichia coli (strain K12) (see 7 papers)
37% identity, 99% coverage of query (270 bits)
DsdC / b2365 D-serine transporter from Escherichia coli K-12 substr. MG1655 (see 4 papers)
DSDX_ECOLI / P08555 D-serine transporter DsdX from Escherichia coli (strain K12) (see 2 papers)
TC 2.A.8.1.5 / P08555 The D-serine transporter, DsdX (KM=60µM) (may also transport D-threonine which inhibits D-serine uptake) (Anfora and Welch, 2006). Eliminating the dsdX gene renders the cell more sensitive to chloramphenicol from Escherichia coli (strain K12) (see 9 papers)
33% identity, 96% coverage of query (246 bits)
DSDX_ECOL6 / A0A0H2VAP9 D-serine transporter DsdX; D-serine-specific permease from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
33% identity, 96% coverage of query (246 bits)
YgbN / b2740 putative transporter YgbN from Escherichia coli K-12 substr. MG1655 (see 4 papers)
33% identity, 97% coverage of query (205 bits)
Build an alignment for 18290 and 10 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory