Searching for up to 100 curated homologs for 18404 FitnessBrowser__Keio:18404 (407 a.a.)

Found high-coverage hits (≥70%) to 16 curated proteins.

Removed hits that are identical to the query, leaving 14

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

SO1219 Phosphopentomutase (EC 5.4.2.7) from Shewanella oneidensis MR-1
    71% identity, 100% coverage of query (576 bits)

A0A518Y5Z2 purine-nucleoside phosphorylase (EC 2.4.2.1) from Helicobacter pylori (see paper)
    56% identity, 100% coverage of query (477 bits)

Dshi_0829 Phosphopentomutase (EC 5.4.2.7) from Dinoroseobacter shibae DFL-12
    48% identity, 100% coverage of query (353 bits)

Q818Z9 phosphopentomutase (EC 5.4.2.7) from Bacillus cereus (see 2 papers)
    46% identity, 100% coverage of query (341 bits)

3ot9A Phosphopentomutase from bacillus cereus bound to glucose-1,6- bisphosphate
    46% identity, 100% coverage of query (341 bits)

3m8zA Phosphopentomutase from bacillus cereus bound with ribose-5-phosphate
    46% identity, 100% coverage of query (341 bits)

4lr7A / Q818Z9 Phosphopentomutase s154a variant (see paper)
    46% identity, 100% coverage of query (339 bits)

4lr9A Phosphopentomutase s154a variant soaked with 2,3-dideoxyribose 5- phosphate
    46% identity, 100% coverage of query (339 bits)

Q9WY14 phosphopentomutase (EC 5.4.2.7) from Thermotoga maritima (see paper)
    45% identity, 99% coverage of query (311 bits)

B3ITC5 phosphopentomutase (EC 5.4.2.7) from Lysinibacillus sphaericus (see paper)
    43% identity, 99% coverage of query (303 bits)

4n7tA / Q8DTU0 Crystal structure of phosphorylated phosphopentomutase from streptococcus mutans
    40% identity, 100% coverage of query (274 bits)

DEOB_STRR6 / Q8DQD0 Phosphopentomutase; Phosphodeoxyribomutase; EC 5.4.2.7 from Streptococcus pneumoniae (strain ATCC BAA-255 / R6) (see paper)
    40% identity, 100% coverage of query (272 bits)

deoB / AAC45496.1 phosphopentomutase from Lactococcus lactis subsp. cremoris (see paper)
    39% identity, 100% coverage of query (269 bits)

Build an alignment

Build an alignment for 18404 and 13 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

YhfW / b3380 putative mutase YhfW from Escherichia coli K-12 substr. MG1655 (see 2 papers)
yhfW / RF|NP_417839 uncharacterized protein yhfW from Escherichia coli K12 (see paper)
    29% identity, 100% coverage of query (113 bits)

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