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Searching for up to 100 curated homologs for 1937013 FitnessBrowser__Keio:1937013 (438 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

Removed hits that are identical to the query, leaving 10

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

YjgT / b4265 L-idonate/5-ketogluconate/gluconate transporter from Escherichia coli K-12 substr. MG1655 (see paper)
idnT / P39344 L-idonate/5-ketogluconate/gluconate transporter from Escherichia coli (strain K12) (see 5 papers)
IDNT_ECOLI / P39344 Gnt-II system L-idonate transporter; L-Ido transporter; L-idonate transporter; 5-keto-D-gluconate transporter; L-idonate/5-ketogluconate/gluconate transporter from Escherichia coli (strain K12) (see 5 papers)
TC 2.A.8.1.2 / P39344 L-Idonate/D-Gluconate:H+ symporter, IdnT, GntW, YjgT from Escherichia coli (see 5 papers)
    62% identity, 100% coverage of query (544 bits)

TC 2.A.8.1.1 / P12012 D-Gluconate:H+ symporter of 448 aas and 11 TMSs from Bacillus subtilis (see 3 papers)
    51% identity, 100% coverage of query (446 bits)

YjhF / b4296 KpLE2 phage-like element; putative transporter YjhF from Escherichia coli K-12 substr. MG1655 (see 4 papers)
    49% identity, 100% coverage of query (375 bits)

RR42_RS28835 gluconate:H+ symporter (gntT) from Cupriavidus basilensis FW507-4G11
    45% identity, 95% coverage of query (362 bits)

BPHYT_RS16725 gluconate:H+ symporter (gntT) from Burkholderia phytofirmans PsJN
    45% identity, 94% coverage of query (353 bits)

YjiB / b4321 fructuronate transporter from Escherichia coli K-12 substr. MG1655 (see 6 papers)
gntP / P0AC94 fructuronate transporter from Escherichia coli (strain K12) (see 6 papers)
TC 2.A.8.1.3 / P0AC94 D-Fructuronate/D-gluconate:H+ symporter, GntP from Escherichia coli (see 5 papers)
    41% identity, 99% coverage of query (348 bits)

DSDX_ECOL6 / A0A0H2VAP9 D-serine transporter DsdX; D-serine-specific permease from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
    37% identity, 98% coverage of query (276 bits)

DsdC / b2365 D-serine transporter from Escherichia coli K-12 substr. MG1655 (see 4 papers)
DSDX_ECOLI / P08555 D-serine transporter DsdX from Escherichia coli (strain K12) (see 2 papers)
TC 2.A.8.1.5 / P08555 The D-serine transporter, DsdX (KM=60µM) (may also transport D-threonine which inhibits D-serine uptake) (Anfora and Welch, 2006). Eliminating the dsdX gene renders the cell more sensitive to chloramphenicol from Escherichia coli (strain K12) (see 9 papers)
    37% identity, 98% coverage of query (274 bits)

GntU / b4476 low-affinity gluconate transporter from Escherichia coli K-12 substr. MG1655 (see 4 papers)
gntU / P0AC96 low-affinity gluconate transporter from Escherichia coli (strain K12) (see 4 papers)
TC 2.A.8.1.8 / P0AC96 Low-affinity (212 from Escherichia coli (strain K12) (see 7 papers)
    36% identity, 98% coverage of query (260 bits)

YgbN / b2740 putative transporter YgbN from Escherichia coli K-12 substr. MG1655 (see 4 papers)
    35% identity, 97% coverage of query (227 bits)

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Build an alignment for 1937013 and 10 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory