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Searching for up to 100 curated homologs for 1937180 b3903 L-rhamnose isomerase (NCBI) (419 a.a.)

Found high-coverage hits (≥70%) to 10 curated proteins.

Removed hits that are identical to the query, leaving 9

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

1de5A / P32170 L-rhamnose isomerase (see paper)
    100% identity, 100% coverage of query (862 bits)

1de6A L-rhamnose isomerase
    100% identity, 99% coverage of query (860 bits)

BWI76_RS00675 L-rhamnose isomerase (EC 5.3.1.14) from Klebsiella michiganensis M5al
    92% identity, 100% coverage of query (820 bits)

L7VQ35 L-rhamnose isomerase (EC 5.3.1.14) from Thermoclostridium stercorarium subsp. stercorarium (see paper)
    56% identity, 99% coverage of query (501 bits)

3uvaC / Q9KCL9 Crystal structure of l-rhamnose isomerase mutant w38f from bacillus halodurans in complex with mn (see paper)
    57% identity, 99% coverage of query (496 bits)

D5LNE5 L-rhamnose isomerase (EC 5.3.1.14) from Thermoanaerobacterium saccharolyticum (see paper)
    55% identity, 97% coverage of query (481 bits)

Dshi_2437 L-rhamnose isomerase (EC 5.3.1.14) from Dinoroseobacter shibae DFL-12
    56% identity, 98% coverage of query (475 bits)

A4XHV7 L-rhamnose isomerase (EC 5.3.1.14) from Caldicellulosiruptor saccharolyticus (see paper)
    54% identity, 98% coverage of query (469 bits)

D9TIY8 L-rhamnose isomerase (EC 5.3.1.14) from Caldicellulosiruptor obsidiansis (see paper)
    51% identity, 98% coverage of query (452 bits)

Build an alignment

Build an alignment for 1937180 and 9 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory