Searching for up to 100 curated homologs for 200217 FitnessBrowser__MR1:200217 (380 a.a.)
Found high-coverage hits (≥70%) to 24 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
Shewana3_3279 Vitamin B12 transporter, permease component (fecCD-like) from Shewanella sp. ANA-3
88% identity, 100% coverage of query (624 bits)
hmuU / CAC34394.1 HmuU protein from Rhizobium leguminosarum (see paper)
38% identity, 88% coverage of query (186 bits)
TC 3.A.1.14.5 / Q56992 HmuU aka YPO0280 aka Y0540, component of Heme (hemin) uptake porter. The receptor, HmuT, binds two parallel stacked heme molecules, and two are transported per reaction cycle from Yersinia pestis (see 4 papers)
35% identity, 90% coverage of query (161 bits)
TC 3.A.1.14.20 / Q7W024 Putative hemin permease, component of Heme-iron (hemin) utilization transporter BhuTUV from Bordetella pertussis (see paper)
35% identity, 90% coverage of query (140 bits)
TC 3.A.1.14.16 / A8GDS7 HemU, component of The heme-specific uptake porter, HemTUV from Serratia proteamaculans (strain 568)
37% identity, 79% coverage of query (140 bits)
fhuG / GI|2832797 ferrichrome transport system permease protein FhuG from Bacillus subtilis (see paper)
33% identity, 83% coverage of query (135 bits)
BTUCA_HALSA / Q9HQ19 Cobalamin import system permease protein BtuC from Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (Halobacterium halobium) (see paper)
TC 3.A.1.14.9 / Q9HQ19 Iron (III) ABC transporter permease, component of The Corrinoid porter, BtuCDE from Halobacterium salinarium (Halobacterium halobium) (see paper)
38% identity, 81% coverage of query (133 bits)
TC 3.A.1.14.18 / Q32AY2 Putative permease of iron compound ABC transport system, component of The heme uptake porter, ShuTUV (Burkhard and Wilks, 2008). Transports a single heme per reaction cycle (Mattle et al., 2010). (3-d structure of ShuT is known (2RG7) from Shigella dysenteriae serotype 1 (strain Sd197) (see paper)
31% identity, 89% coverage of query (133 bits)
TC 3.A.1.14.19 / Q93SS2 HugC, component of Heme uptake porter, HugBCD (Villarreal et al., 2008); also called HmuTUV from Plesiomonas shigelloides (see paper)
37% identity, 79% coverage of query (132 bits)
YFHA_BACSU / O31569 Probable siderophore transport system permease protein YfhA from Bacillus subtilis (strain 168) (see 2 papers)
30% identity, 95% coverage of query (131 bits)
FPUB_BACAN / Q81L64 Petrobactin import system permease protein FpuB from Bacillus anthracis (see paper)
32% identity, 86% coverage of query (130 bits)
FecD / b4288 ferric citrate ABC transporter membrane subunit FecD (EC 7.2.2.18) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
FecD / P15029 ferric citrate ABC transporter membrane subunit FecD (EC 7.2.2.18) from Escherichia coli (strain K12) (see paper)
FECD_ECOLI / P15029 Fe(3+) dicitrate transport system permease protein FecD; Iron(III) dicitrate transport system permease protein FecD from Escherichia coli (strain K12) (see 4 papers)
TC 3.A.1.14.1 / P15029 FecD aka B4288, component of Iron (Fe3+) or ferric-dicitrate porter from Escherichia coli (see 5 papers)
fecD / GB|AAC77244.1 iron(III) dicitrate transport system permease protein FecD from Escherichia coli K12 (see 6 papers)
36% identity, 79% coverage of query (129 bits)
TC 3.A.1.14.7 / Q9X664 FhuB, component of Iron (Fe3+)-hydroxamate porter (transports Fe3+-ferrichrome and Fe3+-ferrioxamine B with FhuD1, and these compounds plus aerobactin and coprogen with FhuD2) from Staphylococcus aureus (see 2 papers)
34% identity, 79% coverage of query (129 bits)
TC 3.A.1.14.4 / Q47085 CbrB, component of Iron-chrysobactine porter from Erwinia chrysanthemi (see paper)
35% identity, 83% coverage of query (128 bits)
MOLB_HAEIN / Q57130 Molybdate import system permease protein MolB from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see 7 papers)
TC 3.A.1.14.11 / Q57130 Probable ABC transporter permease protein HI_1471, component of The molybdate/tungstate ABC transporter, MolABC from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
35% identity, 81% coverage of query (128 bits)
Build an alignment for 200217 and 15 homologs with ≥ 30% identity
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FEUC_BACSU / P40411 Iron-uptake system permease protein FeuC from Bacillus subtilis (strain 168) (see 2 papers)
TC 3.A.1.14.15 / P40411 Iron-uptake system permease protein feuC, component of Uptake transporter for the catecholic trilactone (2, 3-dihydroxybenzoate-glycine-threonine)3 siderophore bacillibactin (for ferric iron scavenging), FeuABC from Bacillus subtilis (see 5 papers)
29% identity, 83% coverage of query (125 bits)
FecC / b4289 ferric citrate ABC transporter membrane subunit FecC (EC 7.2.2.18) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
FecC / P15030 ferric citrate ABC transporter membrane subunit FecC (EC 7.2.2.18) from Escherichia coli (strain K12) (see paper)
FECC_ECOLI / P15030 Fe(3+) dicitrate transport system permease protein FecC; Iron(III) dicitrate transport system permease protein FecC from Escherichia coli (strain K12) (see 4 papers)
TC 3.A.1.14.1 / P15030 FecC aka B4289, component of Iron (Fe3+) or ferric-dicitrate porter from Escherichia coli (see 5 papers)
34% identity, 81% coverage of query (125 bits)
FhuB / b0153 iron(III) hydroxamate ABC transporter membrane subunit (EC 7.2.2.16) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
FhuB / P06972 iron(III) hydroxamate ABC transporter membrane subunit (EC 7.2.2.16) from Escherichia coli (strain K12) (see 2 papers)
FHUB_ECOLI / P06972 Iron(3+)-hydroxamate import system permease protein FhuB; Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein FhuB; Ferrichrome uptake protein FhuB; Iron(III)-hydroxamate import system permease protein FhuB from Escherichia coli (strain K12) (see 7 papers)
TC 3.A.1.14.3 / P06972 FhuB aka B0153, component of Iron (Fe3+)-hydroxamate (ferrichrome, coprogen, aerobactin, ferrioxamine B, schizakinen, rhodotorulic acid) porter, albomycin porter from Escherichia coli (see 7 papers)
34% identity, 84% coverage of query (123 bits)
A0A0H3AMA6 ABC-type vitamin B12 transporter (subunit 3/3) (EC 7.6.2.8) from Vibrio cholerae serotype O1 (see paper)
31% identity, 80% coverage of query (121 bits)
TC 3.A.1.14.8 / Q8GRB1 PvuD, component of The iron-vibrioferrin uptake porter from Vibrio parahaemolyticus (see paper)
32% identity, 94% coverage of query (120 bits)
FHUB_SALTY / O87656 Iron(3+)-hydroxamate import system permease protein FhuB; Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein FhuB; Ferrichrome uptake protein FhuB; Iron(III)-hydroxamate import system permease protein FhuB from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
34% identity, 78% coverage of query (118 bits)
YFIZ_BACSU / O31568 Probable siderophore transport system permease protein YfiZ from Bacillus subtilis (strain 168) (see 2 papers)
32% identity, 93% coverage of query (116 bits)
TC 3.A.1.14.6 / Q9RCF4 ViuG aka VC0778, component of The iron-vibriobactin/enterobactin uptake porter from Vibrio cholerae (see 3 papers)
29% identity, 85% coverage of query (115 bits)
5b57A / B4EKB4 Inward-facing conformation of abc heme importer bhuuv from burkholderia cenocepacia (see paper)
32% identity, 81% coverage of query (96.7 bits)
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Lawrence Berkeley National Laboratory