Searching for up to 100 curated homologs for 201903 FitnessBrowser__MR1:201903 (596 a.a.)
Found high-coverage hits (≥70%) to 31 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
BPHYT_RS03220 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Burkholderia phytofirmans PsJN
52% identity, 99% coverage of query (639 bits)
DMDC_ROSNI / A3SI50 3-methylmercaptopropionyl-CoA dehydrogenase; MMPA-CoA dehydrogenase; EC 1.3.99.41 from Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM) (see paper)
49% identity, 100% coverage of query (594 bits)
AO356_14165 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N2C3
50% identity, 100% coverage of query (590 bits)
Psest_0419 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas stutzeri RCH2
51% identity, 100% coverage of query (588 bits)
PS417_25975 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas simiae WCS417
49% identity, 100% coverage of query (586 bits)
PS417_25960 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas simiae WCS417
51% identity, 100% coverage of query (581 bits)
HP15_2478 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Marinobacter adhaerens HP15
50% identity, 97% coverage of query (577 bits)
AO356_14190 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N2C3
49% identity, 100% coverage of query (563 bits)
AO353_07485 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N2E3
49% identity, 100% coverage of query (560 bits)
Q8L0X1 long-chain acyl-CoA dehydrogenase (EC 1.3.8.8) from Acinetobacter sp. (see paper)
48% identity, 100% coverage of query (558 bits)
Q88L87 medium-chain acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas putida (see paper)
48% identity, 99% coverage of query (526 bits)
dmdC / Q5LLW7 3-(methylsulfanyl)propanoyl-CoA dehydrogenase monomer (EC 1.3.99.41) from Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (see 2 papers)
DMDC_RUEPO / Q5LLW7 3-methylmercaptopropionyl-CoA dehydrogenase; MMPA-CoA dehydrogenase; EC 1.3.99.41 from Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi) (see paper)
45% identity, 95% coverage of query (453 bits)
AZOBR_RS05755 Butyryl-CoA dehydrogenase (EC 1.3.8.1) from Azospirillum brasilense Sp245
44% identity, 100% coverage of query (452 bits)
RR42_RS04580 Butyryl-CoA dehydrogenase (EC 1.3.8.1) from Cupriavidus basilensis FW507-4G11
43% identity, 100% coverage of query (447 bits)
Sama_1743 Acyl-CoA dehydrogenase (EC 1.3.8.-) from Shewanella amazonensis SB2B
42% identity, 100% coverage of query (444 bits)
BCD1_SYNWW / Q0AVM4 Butyryl-CoA dehydrogenase Swol_1933; BCD; EC 1.3.8.1 from Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) (see 2 papers)
35% identity, 95% coverage of query (310 bits)
BCD2_SYNWW / Q0AVA8 Butyryl-CoA dehydrogenase Swol_2052; BCD; EC 1.3.8.1 from Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) (see 2 papers)
35% identity, 80% coverage of query (285 bits)
FADE5_MYCTU / O53666 Broad-specificity linear acyl-CoA dehydrogenase FadE5; Long-chain-acyl-CoA dehydrogenase; Medium-chain-acyl-CoA dehydrogenase; Short-chain-acyl-CoA dehydrogenase; EC 1.3.8.8; EC 1.3.8.7; EC 1.3.8.1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
32% identity, 100% coverage of query (266 bits)
FADE5_MYCS2 / Q3L887 Broad-specificity linear acyl-CoA dehydrogenase FadE5; Long-chain-acyl-CoA dehydrogenase; Medium-chain-acyl-CoA dehydrogenase; Short-chain-acyl-CoA dehydrogenase; EC 1.3.8.8; EC 1.3.8.7; EC 1.3.8.1 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
31% identity, 100% coverage of query (266 bits)
6ksbA Crystal structure of e447a m130g acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c16coa
31% identity, 100% coverage of query (265 bits)
6ksaB / Q3L887 Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c18coa (see paper)
31% identity, 100% coverage of query (264 bits)
6lq8A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c22coa
31% identity, 100% coverage of query (262 bits)
6lq7A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c17coa
31% identity, 100% coverage of query (262 bits)
6lq6A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c20coa
31% identity, 100% coverage of query (262 bits)
6lq1A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c8coa
31% identity, 100% coverage of query (262 bits)
6lq0A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c6coa
31% identity, 100% coverage of query (262 bits)
6lpyA Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c4coa
31% identity, 100% coverage of query (262 bits)
6kseA / O53666 Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria tuberculosisin complex with c18coa (see paper)
32% identity, 100% coverage of query (260 bits)
Build an alignment for 201903 and 28 homologs with ≥ 30% identity
Or download the sequences
dcaA / AAL09094.1 DcaA from Acinetobacter baylyi (see 11 papers)
29% identity, 71% coverage of query (138 bits)
SYN_02586 / Q2LQP0 cyclohexane-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.8.11) from Syntrophus aciditrophicus (strain SB) (see paper)
CHCOA_SYNAS / Q2LQP0 Cyclohexane-1-carbonyl-CoA dehydrogenase; ChCoA; EC 1.3.8.11 from Syntrophus aciditrophicus (strain SB) (see paper)
26% identity, 71% coverage of query (113 bits)
4ktoA / Q92VK1 Crystal structure of a putative isovaleryl-coa dehydrogenase (psi- nysgrc-012251) from sinorhizobium meliloti 1021
22% identity, 71% coverage of query (64.7 bits)
Or start over
Lawrence Berkeley National Laboratory