Searching for up to 100 curated homologs for 202575 FitnessBrowser__MR1:202575 (555 a.a.)

Found high-coverage hits (≥70%) to 33 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

ETTA_ECOL6 / A0A0H2VFI8 Energy-dependent translational throttle protein EttA; Translational regulatory factor EttA; EC 3.6.1.- from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
    80% identity, 100% coverage of query (936 bits)

YjjK / b4391 energy-dependent translational throttle protein EttA from Escherichia coli K-12 substr. MG1655 (see 9 papers)
ETTA_ECOLI / P0A9W3 Energy-dependent translational throttle protein EttA; Translational regulatory factor EttA; EC 3.6.1.- from Escherichia coli (strain K12) (see 2 papers)
CH_004211 ABC transporter, ATP-binding protein YjiK from Escherichia coli K12 (see paper)
    80% identity, 100% coverage of query (936 bits)

3j5sD / P0A9W3 Etta binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamics (see paper)
    80% identity, 100% coverage of query (933 bits)

ETTA_MYCTU / P9WQK3 Energy-dependent translational throttle protein EttA; Translational regulatory factor EttA; EC 3.6.1.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
    52% identity, 100% coverage of query (551 bits)

7msmx / P9WQK3 70SIC in complex with MtbEttA at Trans_R0 state (see paper)
    53% identity, 98% coverage of query (539 bits)

7mscx 70SIC in complex with MtbEttA at Pre_R0 state
    53% identity, 95% coverage of query (537 bits)

YcbH / b0949 ATP-binding protein Uup from Escherichia coli K-12 substr. MG1655 (see 17 papers)
UUP_ECOLI / P43672 ATP-binding protein Uup; EC 3.6.1.- from Escherichia coli (strain K12) (see 5 papers)
    32% identity, 91% coverage of query (260 bits)

TC 3.A.1.120.5 / Q2PGB8 The acetate resistance ABC acetate exporter from Acetobacter aceti (see paper)
    34% identity, 94% coverage of query (256 bits)

YHES_ECOL6 / A0A0H2VBH0 Probable ATP-binding protein YheS from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
    32% identity, 96% coverage of query (236 bits)

YheS / b3352 putative ATP-binding protein YheS from Escherichia coli K-12 substr. MG1655 (see 7 papers)
yheS / RF|NP_417811 uncharacterized ABC transporter ATP-binding protein yheS from Escherichia coli K12 (see 3 papers)
    32% identity, 96% coverage of query (236 bits)

P63389 Probable ATP-binding protein YheS from Escherichia coli (strain K12)
    32% identity, 96% coverage of query (236 bits)

TC 3.A.1.120.4 / Q60248 Carbomycin resistance ATPase (membrane constituent unknown) from Streptomyces thermotolerans (see 2 papers)
    32% identity, 92% coverage of query (226 bits)

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Build an alignment for 202575 and 12 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

8buu9 / W1SM44 8buu9 (see paper)
    29% identity, 92% coverage of query (212 bits)

YbiT / b0820 putative ATP-binding protein YbiT from Escherichia coli K-12 substr. MG1655 (see 7 papers)
YBIT_ECOL6 / P0A9U4 Probable ATP-binding protein YbiT from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
ybiT / MB|P0A9U3 uncharacterized ABC transporter ATP-binding protein ybiT from Escherichia coli K12 (see 2 papers)
    29% identity, 92% coverage of query (211 bits)

P0A9U3 Probable ATP-binding protein YbiT from Escherichia coli (strain K12)
    29% identity, 92% coverage of query (211 bits)

TC 3.A.1.120.1 / Q53762 Macrolide ATPase (membrane constituent unknown) from Streptomyces ambofaciens (see paper)
    30% identity, 92% coverage of query (205 bits)

oleB / Q53712 glucosyl-oleandomycin-exporting ATPase (EC 7.6.2.2) from Streptomyces antibioticus (see paper)
TC 3.A.1.120.3 / Q53712 Oleandomycin resistance ATPase (membrane constituent unknown) from Streptomyces antibioticus (see paper)
    33% identity, 89% coverage of query (205 bits)

7p7q0 7p7q0 (see paper)
    29% identity, 90% coverage of query (203 bits)

TC 3.A.1.120.2 / P25256 Tylosin ATPase (membrane constituent unknown) from Streptomyces fradiae (see paper)
    31% identity, 91% coverage of query (202 bits)

ARB1_YEAST / P40024 ABC transporter ATP-binding protein ARB1; ATP-binding cassette protein involved in ribosome biogenesis 1; EC 3.6.5.- from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 3 papers)
    29% identity, 97% coverage of query (191 bits)

VMLR_BACSU / P39115 Ribosome protection protein VmlR; Multidrug resistance system ATP-binding protein VmlR from Bacillus subtilis (strain 168) (see 3 papers)
TC 3.A.1.121.3 / P39115 Antibiotic (virginiamycin and lincomycin) resistance protein, VmlR from Bacillus subtilis (see paper)
    29% identity, 90% coverage of query (180 bits)

YBP8_SCHPO / O42943 Uncharacterized ABC transporter ATP-binding protein C16H5.08c from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    30% identity, 90% coverage of query (178 bits)

6ha8V / P39115 6ha8V (see paper)
    29% identity, 90% coverage of query (177 bits)

YJQ1_SCHPO / Q9USH9 Uncharacterized ABC transporter ATP-binding protein C825.01 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    29% identity, 93% coverage of query (172 bits)

7p486 7p486 (see paper)
    25% identity, 88% coverage of query (162 bits)

ABCF1_HUMAN / Q8NE71 ATP-binding cassette sub-family F member 1; ATP-binding cassette 50; TNF-alpha-stimulated ABC protein from Homo sapiens (Human) (see 3 papers)
    28% identity, 92% coverage of query (147 bits)

5zxdB / Q8NE71 Crystal structure of atp-bound human abcf1 (see paper)
    27% identity, 95% coverage of query (142 bits)

7nhk0 7nhk0 (see paper)
    25% identity, 86% coverage of query (126 bits)

1yqtA Rnase-l inhibitor
    26% identity, 88% coverage of query (103 bits)

5yv5A Crystal structure of the complex of archaeal ribosomal stalk protein ap1 and archaeal ribosome recycling factor aabce1.
    26% identity, 88% coverage of query (102 bits)

ELF1_SCHPO / O14134 mRNA export factor elf1 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
elf1 / RF|NP_593609.1 AAA family ATPase Elf1 from Schizosaccharomyces pombe (see 2 papers)
    26% identity, 71% coverage of query (96.7 bits)

3bk7A / Q9UZA4 Structure of the complete abce1/rnaase-l inhibitor protein from pyrococcus abysii (see paper)
    25% identity, 88% coverage of query (92.0 bits)

RbsA / b3749 ribose ABC transporter ATP binding subunit from Escherichia coli K-12 substr. MG1655 (see 5 papers)
RbsA / P04983 ribose ABC transporter ATP binding subunit from Escherichia coli (strain K12) (see 2 papers)
RBSA_ECOLI / P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.2.1 / P04983 RbsA aka B3749, component of Ribose porter from Escherichia coli (see 6 papers)
rbsA / GB|AAC76772.1 ribose transport, ATP-binding protein RbsA; EC 3.6.3.17 from Escherichia coli K12 (see 7 papers)
    23% identity, 87% coverage of query (72.0 bits)

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