Sites on a Tree

 

Searching for up to 100 curated homologs for 203280 FitnessBrowser__MR1:203280 (271 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Sama_3201 Formiminoglutamase (EC 3.5.3.8) from Shewanella amazonensis SB2B
    66% identity, 98% coverage of query (366 bits)

CA265_RS21455 Formiminoglutamase (EC 3.5.3.8) from Pedobacter sp. GW460-11-11-14-LB5
    38% identity, 86% coverage of query (148 bits)

Build an alignment

Build an alignment for 203280 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

A4IJM8 arginase (EC 3.5.3.1) from Geobacillus thermodenitrificans (see paper)
    27% identity, 73% coverage of query (53.9 bits)

BWI76_RS08725 Formiminoglutamase (EC 3.5.3.8) from Klebsiella michiganensis M5al
    29% identity, 71% coverage of query (52.4 bits)

4mynA / Q4DSA0 Crystal structure of trypanosoma cruzi formiminoglutamase n114h variant with mn2+2 (see paper)
    23% identity, 81% coverage of query (42.4 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory