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Searching for up to 100 curated homologs for 206471 MicrobesOnline__882:206471 (480 a.a.)

Found high-coverage hits (≥70%) to 100 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

P16171 Mercuric reductase; Hg(II) reductase; EC 1.16.1.1 from Bacillus cereus
    34% identity, 93% coverage of query (261 bits)

MERA_LYSSH / D9J041 Mercuric reductase; Hg(II) reductase; EC 1.16.1.1 from Lysinibacillus sphaericus (Bacillus sphaericus) (see paper)
D9J041 mercury(II) reductase (EC 1.16.1.1) from Lysinibacillus sphaericus (see 2 papers)
    35% identity, 92% coverage of query (258 bits)

5x1yB / D9J041 Structure of mercuric reductase from lysinibacillus sphaericus (see paper)
    35% identity, 92% coverage of query (258 bits)

T1RLH3 mercury(II) reductase (EC 1.16.1.1) from Flavobacterium sp. SOK62 (see paper)
    31% identity, 92% coverage of query (238 bits)

DLDH1_GEOSE / P11959 Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see paper)
P11959 dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Geobacillus stearothermophilus (see 2 papers)
pdhD / GB|CAA37631.1 dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Geobacillus stearothermophilus (see 4 papers)
    34% identity, 94% coverage of query (234 bits)

1ebdA / P11959 Dihydrolipoamide dehydrogenase complexed with the binding domain of the dihydrolipoamide acetylase (see paper)
    34% identity, 94% coverage of query (234 bits)

A8UT36 mercury(II) reductase (EC 1.16.1.1) from Hydrogenivirga sp. 128-5-R1-1 (see paper)
    35% identity, 97% coverage of query (233 bits)

MERA_PSEAI / P00392 Mercuric reductase; Hg(II) reductase; EC 1.16.1.1 from Pseudomonas aeruginosa (see 2 papers)
    36% identity, 96% coverage of query (229 bits)

4k8dA Crystal structure of the c558(464)a/c559(465)a double mutant of tn501 mera in complex with NADPH and hg2+
    37% identity, 91% coverage of query (227 bits)

E0XF09 mercury(II) reductase (EC 1.16.1.1) from Serratia marcescens (see paper)
    34% identity, 96% coverage of query (225 bits)

V5TDP2 mercury(II) reductase (EC 1.16.1.1) from uncultured bacterium (see paper)
    34% identity, 96% coverage of query (225 bits)

4k7zA / P00392 Crystal structure of the c136(42)a/c141(47)a double mutant of tn501 mera in complex with NADP and hg2+
    35% identity, 98% coverage of query (222 bits)

Q93UN8 mercury(II) reductase (EC 1.16.1.1) from Escherichia coli (see paper)
    34% identity, 97% coverage of query (221 bits)

B4U9T7 mercury(II) reductase (EC 1.16.1.1) from Hydrogenobaculum sp. Y04AAS1 (see paper)
    33% identity, 92% coverage of query (220 bits)

DLDH_THESS / P85207 Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus (strain ATCC 700910 / SA-01) (see paper)
    37% identity, 92% coverage of query (220 bits)

MERA_STRLI / P30341 Mercuric reductase; Hg(II) reductase; EC 1.16.1.1 from Streptomyces lividans (see paper)
    35% identity, 90% coverage of query (219 bits)

Q97VD9 mercury(II) reductase (EC 1.16.1.1) from Saccharolobus solfataricus (see paper)
merA / ABL96630.1 MerA from Saccharolobus solfataricus (see 2 papers)
    32% identity, 93% coverage of query (219 bits)

pdhD / P21880 dihydrolipoyl dehydrogenase component subunit (EC 1.8.1.4) from Bacillus subtilis (strain 168) (see 2 papers)
pdhD / GB|CAB13334.1 dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Bacillus subtilis (see paper)
    33% identity, 94% coverage of query (214 bits)

4ywoA / A4YG49 Mercuric reductase from metallosphaera sedula (see paper)
    34% identity, 93% coverage of query (214 bits)

A4YG49 mercury(II) reductase (EC 1.16.1.1) from Metallosphaera sedula (see paper)
    34% identity, 93% coverage of query (214 bits)

lpdA / O84561 dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis (strain D/UW-3/Cx) (see 4 papers)
    32% identity, 93% coverage of query (213 bits)

Q04829 dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii (see 3 papers)
    34% identity, 95% coverage of query (207 bits)

2eq6A / Q5SLR0 Crystal structure of lipoamide dehydrogenase from thermus thermophilus hb8
    37% identity, 92% coverage of query (207 bits)

3o0hB / A0A0H3LWY9 Crystal structure of glutathione reductase from bartonella henselae
    32% identity, 93% coverage of query (206 bits)

acoL TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum (see paper)
AAA21748.1 dihydrolipoamide dehydrogenase from Clostridium magnum (see paper)
    32% identity, 95% coverage of query (204 bits)

2yquA / Q5SLK6 Crystal structures and evolutionary relationship of two different lipoamide dehydrogenase(e3s) from thermus thermophilus
    33% identity, 93% coverage of query (202 bits)

2yquB Crystal structures and evolutionary relationship of two different lipoamide dehydrogenase(e3s) from thermus thermophilus
    33% identity, 93% coverage of query (202 bits)

2eq7A Crystal structure of lipoamide dehydrogenase from thermus thermophilus hb8 with psbdo
    33% identity, 93% coverage of query (202 bits)

dld1 / RF|NP_593496.1 dihydrolipoamide dehydrogenase Dld1; EC 1.8.1.4 from Schizosaccharomyces pombe (see paper)
    31% identity, 93% coverage of query (198 bits)

A5N930 dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri (see paper)
    30% identity, 93% coverage of query (196 bits)

P50970 dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis (see paper)
    31% identity, 92% coverage of query (196 bits)

3urhB / Q92LK0 Crystal structure of a dihydrolipoamide dehydrogenase from sinorhizobium meliloti 1021
    33% identity, 93% coverage of query (195 bits)

DLDH_CHATD / G0SB20 Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) (Thermochaetoides thermophila) (see 2 papers)
    33% identity, 95% coverage of query (192 bits)

mtr / Q8NP23 mycothione reductase monomer (EC 1.8.1.15) from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) (see paper)
    30% identity, 88% coverage of query (188 bits)

2rabA Structure of glutathione amide reductase from chromatium gracile in complex with NAD
    34% identity, 93% coverage of query (187 bits)

2r9zB / D0VWY5 Glutathione amide reductase from chromatium gracile (see paper)
    34% identity, 93% coverage of query (185 bits)

GASHR_MARGR / D0VWY5 Glutathione amide reductase; GAR; EC 1.8.1.16 from Marichromatium gracile (Chromatium gracile) (see 2 papers)
    33% identity, 94% coverage of query (185 bits)

Q8MUB0 dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Bombyx mori (see paper)
    30% identity, 93% coverage of query (184 bits)

P48642 glutathione-disulfide reductase (EC 1.8.1.7) from Oryza sativa (see 2 papers)
    32% identity, 94% coverage of query (183 bits)

DLD / Q9XLX6 dihydrolipoyl dehydrogenase subunit from Ascaris suum (see paper)
    30% identity, 93% coverage of query (182 bits)

Build an alignment

Build an alignment for 206471 and 40 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

Q8VPK7 dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae (see paper)
    29% identity, 96% coverage of query (181 bits)

SMc03204 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Sinorhizobium meliloti 1021
    31% identity, 96% coverage of query (181 bits)

8ajjA Crystal structure of the disulfide reductase mera from staphylococcus aureus
    29% identity, 92% coverage of query (181 bits)

LEGRE_SOYBN / Q41219 Leghemoglobin reductase; Ferric leghemoglobin reductase; FLbR; EC 1.6.2.6 from Glycine max (Soybean) (Glycine hispida) (see paper)
    31% identity, 90% coverage of query (180 bits)

Lpd / b0116 lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli K-12 substr. MG1655 (see 9 papers)
lpd / P0A9P0 lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli (strain K12) (see 19 papers)
DLDH_ECOLI / P0A9P0 Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; Glycine cleavage system L protein; EC 1.8.1.4 from Escherichia coli (strain K12) (see paper)
P0A9P0 pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli (see 4 papers)
lpd / SP|P0A9P1 dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Escherichia coli K12 (see 10 papers)
    31% identity, 92% coverage of query (180 bits)

4jdrA / P0A9P0 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase from escherichia coli (see paper)
    31% identity, 92% coverage of query (179 bits)

6kgyB / P77212 Hocl-induced flavoprotein disulfide reductase rcla from escherichia coli (see paper)
    31% identity, 91% coverage of query (177 bits)

6kyyA Cu(ii) complex of hocl-induced flavoprotein disulfide reductase rcla from escherichia coli
    30% identity, 91% coverage of query (177 bits)

4dnaA / Q92PC0 Crystal structure of putative glutathione reductase from sinorhizobium meliloti 1021
    33% identity, 93% coverage of query (177 bits)

8ajkB / Q2G0I4 Crystal structure of a c43s variant from the disulfide reductase mera from staphylococcus aureus (see paper)
    29% identity, 92% coverage of query (176 bits)

6n7fA / Q9A0E2 1.90 angstrom resolution crystal structure of glutathione reductase from streptococcus pyogenes in complex with fad.
    33% identity, 92% coverage of query (176 bits)

DLDH1_PSEPU / P09063 Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of branched-chain alpha-keto acid dehydrogenase complex; LPD-Val; EC 1.8.1.4 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see paper)
    31% identity, 95% coverage of query (175 bits)

1lvlA / P09063 The refined structure of pseudomonas putida lipoamide dehydrogenase complexed with NAD+ at 2.45 angstroms resolution (see paper)
    31% identity, 95% coverage of query (175 bits)

DLDH_YEAST / P09624 Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 7 papers)
    30% identity, 92% coverage of query (174 bits)

DLDH_PSEFL / P14218 Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens (see paper)
    30% identity, 93% coverage of query (174 bits)

1v59A Crystal structure of yeast lipoamide dehydrogenase complexed with NAD+
    30% identity, 92% coverage of query (174 bits)

1jehA / P09624 Crystal structure of yeast e3, lipoamide dehydrogenase (see paper)
    30% identity, 92% coverage of query (174 bits)

5u8uD / Q9I3D1 Dihydrolipoamide dehydrogenase (lpdg) from pseudomonas aeruginosa (see paper)
    30% identity, 93% coverage of query (174 bits)

5u8vA Dihydrolipoamide dehydrogenase (lpdg) from pseudomonas aeruginosa bound to NAD+
    30% identity, 92% coverage of query (173 bits)

5u8wA Dihydrolipoamide dehydrogenase (lpdg) from pseudomonas aeruginosa bound to nadh
    30% identity, 92% coverage of query (172 bits)

1dxlA / P31023 Dihydrolipoamide dehydrogenase of glycine decarboxylase from pisum sativum (see paper)
    29% identity, 94% coverage of query (172 bits)

DLDH_PEA / P31023 Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine cleavage system L protein; Pyruvate dehydrogenase complex E3 subunit; E3; PDC-E3; EC 1.8.1.4 from Pisum sativum (Garden pea) (Lathyrus oleraceus) (see 2 papers)
P31023 pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum (see 2 papers)
    29% identity, 94% coverage of query (171 bits)

3dh9A / P91938 Crystal structure of drosophila thioredoxin reductase, wild-type
    30% identity, 94% coverage of query (169 bits)

2nvkX Crystal structure of thioredoxin reductase from drosophila melanogaster
    30% identity, 94% coverage of query (169 bits)

TRXR1_DROME / P91938 Thioredoxin reductase 1, mitochondrial; EC 1.8.1.9 from Drosophila melanogaster (Fruit fly) (see 8 papers)
P91938 thioredoxin-disulfide reductase (EC 1.8.1.9) from Drosophila melanogaster (see 3 papers)
    30% identity, 94% coverage of query (169 bits)

DLD / P09622 dihydrolipoyl dehydrogenase monomer from Homo sapiens (see 11 papers)
DLDH_HUMAN / P09622 Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine cleavage system L protein; EC 1.8.1.4 from Homo sapiens (Human) (see 18 papers)
A0A024R713 2-oxoglutarate dehydrogenase system (subunit 3/3) (EC 1.2.1.105) from Homo sapiens (see paper)
P09622 pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens (see 16 papers)
    30% identity, 93% coverage of query (168 bits)

5grtA Human glutathione reductase a34e, r37w mutant, glutathionylspermidine complex
    29% identity, 92% coverage of query (167 bits)

4grtA Human glutathione reductase a34e, r37w mutant, mixed disulfide between trypanothione and the enzyme
    29% identity, 92% coverage of query (167 bits)

3grtA Human glutathione reductase a34e, r37w mutant, oxidized trypanothione complex
    29% identity, 92% coverage of query (167 bits)

2grtA Human glutathione reductase a34e, r37w mutant, oxidized glutathione complex
    29% identity, 92% coverage of query (167 bits)

1zmdA Crystal structure of human dihydrolipoamide dehydrogenase complexed to nadh
    30% identity, 93% coverage of query (167 bits)

1zmcA Crystal structure of human dihydrolipoamide dehydrogenase complexed to NAD+
    30% identity, 93% coverage of query (167 bits)

DLDH_AZOVI / P18925 Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Azotobacter vinelandii (see paper)
GI|142325 dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Azotobacter vinelandii (see 3 papers)
    32% identity, 93% coverage of query (167 bits)

6hg8B / P09622 Crystal structure of the r460g disease-causing mutant of the human dihydrolipoamide dehydrogenase.
    30% identity, 92% coverage of query (167 bits)

3ladA / P18925 Refined crystal structure of lipoamide dehydrogenase from azotobacter vinelandii at 2.2 angstroms resolution. A comparison with the structure of glutathione reductase (see paper)
    32% identity, 92% coverage of query (166 bits)

3ic9C / Q488E0 The structure of dihydrolipoamide dehydrogenase from colwellia psychrerythraea 34h.
    30% identity, 92% coverage of query (166 bits)

6uziC / A0A077ELH4 Crystal structure of dihydrolipoyl dehydrogenase from elizabethkingia anophelis nuhp1
    29% identity, 93% coverage of query (164 bits)

6cmzA / B4EEF2 2.3 angstrom resolution crystal structure of dihydrolipoamide dehydrogenase from burkholderia cenocepacia in complex with fad and NAD
    31% identity, 95% coverage of query (162 bits)

6cmzB 2.3 angstrom resolution crystal structure of dihydrolipoamide dehydrogenase from burkholderia cenocepacia in complex with fad and NAD
    31% identity, 92% coverage of query (160 bits)

2qaeA / P90597 Crystal structure analysis of trypanosoma cruzi lipoamide dehydrogenase
    30% identity, 88% coverage of query (159 bits)

6awaA / Q88FB1 1.83 angstrom resolution crystal structure of dihydrolipoyl dehydrogenase from pseudomonas putida in complex with fad and adenosine-5'-monophosphate.
    29% identity, 93% coverage of query (158 bits)

4gr1A The binding of the retro-analogue of glutathione disulfide to glutathione reductase
    29% identity, 92% coverage of query (157 bits)

3sqpA Structure of human glutathione reductase complexed with pyocyanin, an agent with antimalarial activity
    29% identity, 92% coverage of query (157 bits)

2gh5A Crystal structure of human glutathione reductase complexed with a fluoro-analogue of the menadione derivative m5
    29% identity, 92% coverage of query (157 bits)

2aaqA Crystal structure analysis of the human glutahione reductase, complexed with gopi
    29% identity, 92% coverage of query (157 bits)

1xanA Human glutathione reductase in complex with a xanthene inhibitor
    29% identity, 92% coverage of query (157 bits)

1grbA Substrate binding and catalysis by glutathione reductase as derived from refined enzyme: substrate crystal structures at 2 angstroms resolution
    29% identity, 92% coverage of query (157 bits)

1dncA Human glutathione reductase modified by diglutathione-dinitroso-iron
    29% identity, 92% coverage of query (157 bits)

1bwcA Structure of human glutathione reductase complexed with ajoene inhibitor and subversive substrate
    29% identity, 92% coverage of query (157 bits)

3djjA / P00390 Catalytic cycle of human glutathione reductase near 1 a resolution (see paper)
    29% identity, 92% coverage of query (157 bits)

GSR / P00390 glutathione reductase subunit (EC 1.8.1.7) from Homo sapiens (see 6 papers)
GSHR_HUMAN / P00390 Glutathione reductase, mitochondrial; GR; GRase; EC 1.8.1.7 from Homo sapiens (Human) (see 2 papers)
    29% identity, 92% coverage of query (157 bits)

TRXR2_RAT / Q9Z0J5 Thioredoxin reductase 2, mitochondrial; Thioredoxin reductase TR3; EC 1.8.1.9 from Rattus norvegicus (Rat) (see paper)
Q9Z0J5 thioredoxin-disulfide reductase (EC 1.8.1.9) from Rattus norvegicus (see paper)
    31% identity, 93% coverage of query (155 bits)

3ii4A Structure of mycobacterial lipoamide dehydrogenase bound to a triazaspirodimethoxybenzoyl inhibitor
    31% identity, 92% coverage of query (153 bits)

8u0qA Co-crystal structure of optimized analog tdi-13537 provided new insights into the potency determinants of the sulfonamide inhibitor series
    32% identity, 92% coverage of query (152 bits)

8ct4A Cryo-em structure of mtb lpd bound to inhibitor complex with 2-((2- cyano-n,5-dimethyl-1h-indole)-7-sulfonamido)-n-(4-(oxetan-3-yl)-3,4- dihydro-2h-benzo[b] [1,4]oxazin-7-yl)acetamide
    32% identity, 92% coverage of query (152 bits)

DLDH_MYCTU / P9WHH9 Dihydrolipoyl dehydrogenase; LPD; Component of peroxynitrite reductase/peroxidase complex; Component of PNR/P; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 6 papers)
P9WHH8 dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis (see paper)
P9WHH9 dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis (see paper)
    32% identity, 92% coverage of query (152 bits)

7kmyA / P9WHH9 Structure of mtb lpd bound to 010705 (see paper)
    32% identity, 92% coverage of query (152 bits)

4m52A Structure of mtb lpd bound to sl827
    32% identity, 92% coverage of query (152 bits)

5v36A / Q8DUR5 1.88 angstrom resolution crystal structure of glutathione reductase from streptococcus mutans ua159 in complex with fad
    30% identity, 88% coverage of query (152 bits)

6du7A / A0A0U0ARX4 Glutathione reductase from streptococcus pneumoniae (see paper)
    31% identity, 85% coverage of query (150 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory