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Searching for up to 100 curated homologs for 206728 MicrobesOnline__882:206728 (261 a.a.)

Found high-coverage hits (≥70%) to 17 curated proteins.

Removed hits that are identical to the query, leaving 16

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 5.B.12.1.1 / SFW35650 SFW35650.1 putative sulfite reductase-associated electron transfer protein DsrO, component of Transmembrane one electron carrier complex, DsrMJKOP from Desulfovibrio desulfuricans
    66% identity, 100% coverage of query (363 bits)

TC 5.A.3.10.1 / Q7WMZ5 Tetrathionate reductase subunit B, component of Tetrathionate reductase, TtrABC from Bordetella bronchiseptica (Alcaligenes bronchisepticus) (see paper)
    37% identity, 98% coverage of query (139 bits)

dsrO / Q9F2A2 DsrO from Allochromatium vinosum (see paper)
    34% identity, 99% coverage of query (138 bits)

ttrB / Q7CQM9 tetrathionate reductase β subunit from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 3 papers)
TTRB_SALTY / Q7CQM9 Tetrathionate reductase subunit B; Tetrathionate reductase electron transport protein from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 3 papers)
ttrB / CAB37414.1 tetrathionate reductase subunit B (TtrB) from Salmonella enterica subsp. enterica serovar Typhimurium (see 2 papers)
    35% identity, 100% coverage of query (134 bits)

TC 5.A.3.11.1 / Q5P036 Molybdenum enzyme, medium subunit,related to phenylacetyl-CoA: acceptor oxidoreductase, component of Phenylacetyl-CoA:acceptor oxidoreductase (see paper)
    37% identity, 80% coverage of query (128 bits)

qrcC / Q72E85 cytochrome c3:menaquinone reductase subunit C from Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough) (see 3 papers)
QRCC_DESVH / Q72E85 Menaquinone reductase, iron-sulfur cluster-binding subunit; Quinone reductase complex subunit C; Type I cytochrome c3:menaquinone oxidoreductase subunit C; EC 1.97.-.- from Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough) (see 2 papers)
    36% identity, 80% coverage of query (125 bits)

padC / A0A2R4BI99 phenylacetyl-CoA:acceptor oxidoreductase subunit γ (EC 1.17.5.1) from Thauera aromatica K172 (see paper)
    39% identity, 79% coverage of query (123 bits)

E9RFC9 selenate reductase (EC 1.97.1.9) from Mesobacillus selenatarsenatis (see paper)
    34% identity, 81% coverage of query (118 bits)

6f0kB / D0MDD5 Alternative complex iii (see paper)
    34% identity, 80% coverage of query (117 bits)

sirC / Q8EJI2 SirC ferredoxin from Shewanella oneidensis (strain MR-1) (see 10 papers)
    33% identity, 99% coverage of query (116 bits)

arrB / Q7WTT9 respiratory arsenate reductase small subunit (EC 1.20.99.1) from Shewanella sp. (strain ANA-3) (see 3 papers)
ARRB_SHESA / Q7WTT9 Arsenate respiratory reductase iron-sulfur subunit ArrB; Arsenate respiratory reductase small subunit; ARR small subunit from Shewanella sp. (strain ANA-3) (see 4 papers)
6cz7B / Q7WTT9 The arsenate respiratory reductase (arr) complex from shewanella sp. Ana-3 (see paper)
arrB / AAQ01673.1 ArrB from Shewanella sp. ANA-3 (see 2 papers)
    35% identity, 80% coverage of query (115 bits)

6lodB / A7NJ88 Cryo-em structure of the air-oxidized photosynthetic alternative complex iii from roseiflexus castenholzii (see paper)
    30% identity, 86% coverage of query (111 bits)

YjcJ / b4072 putative menaquinol-cytochrome c reductase 4Fe-4S subunit (EC 7.1.1.8) from Escherichia coli K-12 substr. MG1655 (see paper)
    32% identity, 100% coverage of query (108 bits)

arxB / Q0AC67 anaerobic arsenite oxidase small subunit ArxB (EC 1.20.99.1) from Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) (see 6 papers)
    31% identity, 80% coverage of query (107 bits)

6btmB / A5FJF2 Structure of alternative complex iii from flavobacterium johnsoniae (wild type) (see paper)
    30% identity, 72% coverage of query (97.4 bits)

YdhX / b1671 putative 4Fe-4S ferredoxin-like protein YdhX from Escherichia coli K-12 substr. MG1655 (see 4 papers)
YDHX_ECOLI / P77375 Uncharacterized ferredoxin-like protein YdhX from Escherichia coli (strain K12) (see paper)
    30% identity, 99% coverage of query (80.9 bits)

Build an alignment

Build an alignment for 206728 and 16 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory