Sites on a Tree

 

Searching for up to 100 curated homologs for 209274 MicrobesOnline__882:209274 (197 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

WbbJ / b2033 putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ from Escherichia coli K-12 substr. MG1655 (see paper)
    31% identity, 84% coverage of query (61.2 bits)

Build an alignment

Build an alignment for 209274 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

cpsI polysaccharide capsule synthesis protein CpsI from Streptococcus iniae (see paper)
    27% identity, 72% coverage of query (57.0 bits)

WcaF / b2054 colanic acid biosynthesis acetyltransferase WcaF from Escherichia coli K-12 substr. MG1655 (see 7 papers)
wcaF / P0ACD2 colanic acid biosynthesis acetyltransferase WcaF from Escherichia coli (strain K12) (see 6 papers)
    30% identity, 95% coverage of query (56.6 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory