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Searching for up to 100 curated homologs for 350803 FitnessBrowser__Btheta:350803 (476 a.a.)

Found high-coverage hits (≥70%) to 22 curated proteins.

Removed hits that are identical to the query, leaving 21

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

BWI76_RS00680 Rhamnulokinase (EC 2.7.1.5) from Klebsiella michiganensis M5al
    40% identity, 98% coverage of query (329 bits)

RhaB / b3904 rhamnulokinase (EC 2.7.1.5) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
rhaB / P32171 rhamnulokinase (EC 2.7.1.5) from Escherichia coli (strain K12) (see 5 papers)
RHAB_ECOLI / P32171 L-Rhamnulokinase; RhaB; RhuK; ATP:L-rhamnulose phosphotransferase; L-rhamnulose 1-kinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli (strain K12) (see 6 papers)
    40% identity, 99% coverage of query (322 bits)

2cgjA / P32171 Crystal structure of l-rhamnulose kinase from escherichia coli in complex with l-fructose and adp. (see paper)
    39% identity, 99% coverage of query (318 bits)

2uytA Structure of l-rhamnulose kinase in complex with adp and beta-l- rhamnulose.
    39% identity, 99% coverage of query (318 bits)

2cglA Crystal structure of l-rhamnulose kinase from escherichia coli in complex with l-fructose, adp and a modeled atp gamma phosphate.
    39% identity, 99% coverage of query (318 bits)

RHAB_ECOUT / Q1R415 Rhamnulokinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli (strain UTI89 / UPEC) (see paper)
    38% identity, 99% coverage of query (316 bits)

Build an alignment

Build an alignment for 350803 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

FucK / b2803 L-fuculokinase (EC 2.7.1.51) from Escherichia coli K-12 substr. MG1655 (see 7 papers)
fucK / P11553 L-fuculokinase (EC 2.7.1.51) from Escherichia coli (strain K12) (see 6 papers)
FUCK_ECOLI / P11553 L-fuculokinase; L-fuculose kinase; EC 2.7.1.51 from Escherichia coli (strain K12) (see 3 papers)
    29% identity, 84% coverage of query (147 bits)

BWI76_RS22930 L-fuculokinase (EC 2.7.1.51) from Klebsiella michiganensis M5al
    29% identity, 84% coverage of query (136 bits)

YOAC_BACSU / O34861 Putative sugar kinase YoaC; EC 2.7.1.- from Bacillus subtilis (strain 168) (see paper)
    25% identity, 91% coverage of query (85.1 bits)

Q9WXX1 xylulokinase (EC 2.7.1.17) from Thermotoga maritima (see paper)
    23% identity, 74% coverage of query (79.0 bits)

3ll3B The crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus
    20% identity, 74% coverage of query (65.5 bits)

3ll3A / Q5FM28 The crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus
    20% identity, 74% coverage of query (65.1 bits)

mtlY / Q4KC52 xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) (see paper)
    21% identity, 78% coverage of query (61.6 bits)

YdeV / b1511 autoinducer-2 kinase (EC 2.7.1.189) from Escherichia coli K-12 substr. MG1655 (see 18 papers)
lsrK / P77432 autoinducer-2 kinase (EC 2.7.1.189) from Escherichia coli (strain K12) (see 25 papers)
LSRK_ECOLI / P77432 Autoinducer-2 kinase; AI-2 kinase; EC 2.7.1.189 from Escherichia coli (strain K12) (see 3 papers)
P77432 autoinducer-2 kinase (EC 2.7.1.189) from Escherichia coli (see 2 papers)
lsrK / RF|NP_416028 autoinducer 2 kinase lsrK from Escherichia coli K12 (see 3 papers)
    24% identity, 74% coverage of query (60.8 bits)

5ya2A Crystal structure of lsrk-hpr complex with adp
    23% identity, 74% coverage of query (60.8 bits)

5ya1A / P77432 Crystal structure of lsrk-hpr complex with atp (see paper)
    24% identity, 74% coverage of query (58.2 bits)

AO356_27695 Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens FW300-N2C3
    20% identity, 79% coverage of query (53.9 bits)

5htvA / Q8L794 Putative sugar kinases from arabidopsis thaliana in complex with amppnp (see paper)
    23% identity, 89% coverage of query (49.7 bits)

XK1_ARATH / Q8L794 D-ribulose kinase; D-ribulokinase; Inactive Xylulose kinase 1; Atxk-1; EC 2.7.1.47 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    23% identity, 89% coverage of query (49.7 bits)

5htxA Putative sugar kinases from arabidopsis thaliana in complex with adp
    23% identity, 89% coverage of query (49.7 bits)

C7NMH3 xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis (see paper)
    19% identity, 71% coverage of query (49.3 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory