Sites on a Tree

 

Searching for up to 100 curated homologs for 351187 FitnessBrowser__Btheta:351187 (350 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

DhnA / b2097 fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
fbaB / P0A991 fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli (strain K12) (see 12 papers)
ALF1_ECOLI / P0A991 Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Escherichia coli (strain K12) (see paper)
    66% identity, 100% coverage of query (493 bits)

Build an alignment

Build an alignment for 351187 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

MJ1585 / Q58980 fructose 1,6-bisphosphate aldolase monomer (EC 2.2.1.11; EC 4.1.2.13) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see paper)
DKFP_METJA / Q58980 Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase; DKFP synthase; Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 2.2.1.11; EC 4.1.2.13 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
Q58980 6-deoxy-5-ketofructose 1-phosphate synthase (EC 2.2.1.11) from Methanocaldococcus jannaschii (see paper)
    27% identity, 80% coverage of query (73.9 bits)

ALF1_HALS3 / B0R3Y0 Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) (see paper)
    27% identity, 76% coverage of query (70.5 bits)

ADHS_METMP / Q6LZE3 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase; ADH synthase; ADHS; ADTH synthase; EC 2.2.1.10 from Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL) (see paper)
    24% identity, 75% coverage of query (53.1 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory