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Searching for up to 100 curated homologs for 351334 BT1806 acyl-CoA dehydrogenase (NCBI ptt file) (568 a.a.)

Found high-coverage hits (≥70%) to 12 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

dmdC / Q5LLW7 3-(methylsulfanyl)propanoyl-CoA dehydrogenase monomer (EC 1.3.99.41) from Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (see 2 papers)
DMDC_RUEPO / Q5LLW7 3-methylmercaptopropionyl-CoA dehydrogenase; MMPA-CoA dehydrogenase; EC 1.3.99.41 from Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi) (see paper)
    35% identity, 70% coverage of query (206 bits)

AZOBR_RS05755 Butyryl-CoA dehydrogenase (EC 1.3.8.1) from Azospirillum brasilense Sp245
    32% identity, 79% coverage of query (192 bits)

Build an alignment

Build an alignment for 351334 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

BPHYT_RS03220 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Burkholderia phytofirmans PsJN
    28% identity, 85% coverage of query (191 bits)

Sama_1743 Acyl-CoA dehydrogenase (EC 1.3.8.-) from Shewanella amazonensis SB2B
    32% identity, 75% coverage of query (179 bits)

RR42_RS04580 Butyryl-CoA dehydrogenase (EC 1.3.8.1) from Cupriavidus basilensis FW507-4G11
    32% identity, 70% coverage of query (175 bits)

HP15_2478 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Marinobacter adhaerens HP15
    29% identity, 79% coverage of query (172 bits)

Q88L87 medium-chain acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas putida (see paper)
    30% identity, 71% coverage of query (172 bits)

Psest_0419 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas stutzeri RCH2
    29% identity, 77% coverage of query (168 bits)

AO356_14190 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N2C3
    29% identity, 73% coverage of query (164 bits)

BCD2_SYNWW / Q0AVA8 Butyryl-CoA dehydrogenase Swol_2052; BCD; EC 1.3.8.1 from Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) (see 2 papers)
    29% identity, 90% coverage of query (162 bits)

ACAD9_RAT / B1WC61 Complex I assembly factor ACAD9, mitochondrial; Acyl-CoA dehydrogenase family member 9; ACAD-9; EC 1.3.8.- from Rattus norvegicus (Rat) (see paper)
    29% identity, 71% coverage of query (151 bits)

3b96A Structural basis for substrate fatty-acyl chain specificity: crystal structure of human very-long-chain acyl-coa dehydrogenase
    27% identity, 75% coverage of query (125 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory