Sites on a Tree

 

Searching for up to 100 curated homologs for 352219 FitnessBrowser__Btheta:352219 (417 a.a.)

Found high-coverage hits (≥70%) to 23 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

2g3fA / P42084 Crystal structure of imidazolonepropionase complexed with imidazole-4- acetic acid sodium salt, a substrate homologue (see paper)
    43% identity, 99% coverage of query (339 bits)

HUTI_BACSU / P42084 Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis (strain 168) (see paper)
P42084 imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis (see 4 papers)
    43% identity, 99% coverage of query (339 bits)

2bb0A Structure of imidazolonepropionase from bacillus subtilis
    43% identity, 99% coverage of query (339 bits)

SO0095 Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis MR-1
    43% identity, 84% coverage of query (285 bits)

RR42_RS16905 Imidazolonepropionase (EC 3.5.2.7) from Cupriavidus basilensis FW507-4G11
    39% identity, 93% coverage of query (259 bits)

PfGW456L13_317 Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens GW456-L13
    40% identity, 93% coverage of query (250 bits)

Pf1N1B4_1579 Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens FW300-N1B4
    40% identity, 93% coverage of query (249 bits)

HUTI_AGRFC / Q8U8Z6 Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see paper)
Q8U8Z6 imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens (see 2 papers)
    39% identity, 92% coverage of query (248 bits)

2gokA / Q8U8Z6 Crystal structure of the imidazolonepropionase from agrobacterium tumefaciens at 1.87 a resolution (see paper)
    39% identity, 89% coverage of query (247 bits)

Ac3H11_2550 Imidazolonepropionase (EC 3.5.2.7) from Acidovorax sp. GW101-3H11
    38% identity, 92% coverage of query (247 bits)

2puzB Crystal structure of imidazolonepropionase from agrobacterium tumefaciens with bound product n-formimino-l-glutamate
    39% identity, 89% coverage of query (247 bits)

PGA1_c36350 Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens BS107
    37% identity, 98% coverage of query (246 bits)

Pf6N2E2_3798 Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens FW300-N2E2
    39% identity, 93% coverage of query (246 bits)

AO356_09595 Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens FW300-N2C3
    40% identity, 93% coverage of query (246 bits)

AO353_12280 Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens FW300-N2E3
    39% identity, 93% coverage of query (245 bits)

hutI / O31200 imidazolonepropionase (EC 3.5.2.7) from Pseudomonas putida (see paper)
    39% identity, 92% coverage of query (241 bits)

A0KF84 Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
    38% identity, 86% coverage of query (233 bits)

Ga0059261_3964 Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis DSMZ 15582
    40% identity, 97% coverage of query (232 bits)

2q09A Crystal structure of imidazolonepropionase from environmental sample with bound inhibitor 3-(2,5-dioxo-imidazolidin-4-yl)-propionic acid
    38% identity, 86% coverage of query (231 bits)

2oofA / A0KF84 The crystal structure of 4-imidazolone-5-propanoate amidohydrolase from environmental sample
    38% identity, 86% coverage of query (230 bits)

SM_b21166 Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti 1021
    40% identity, 91% coverage of query (218 bits)

Build an alignment

Build an alignment for 352219 and 21 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

6oh9A / Q07729 Yeast guanine deaminase (see paper)
    23% identity, 93% coverage of query (48.1 bits)

6ohaA Yeast guanine deaminase
    23% identity, 93% coverage of query (48.1 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory