Sites on a Tree

 

Searching for up to 100 curated homologs for 352820 FitnessBrowser__Btheta:352820 (1421 a.a.)

Found high-coverage hits (≥70%) to 16 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

6s6zA / Q56307 Structure of beta-galactosidase from thermotoga maritima (see paper)
    38% identity, 71% coverage of query (673 bits)

AAD36268.1 β-galactosidase Z (LacZ;TmLac;TM1193) (EC 3.2.1.23) (see protein)
    38% identity, 71% coverage of query (672 bits)

AAC24219.1 β-galactosidase (BgalB) (EC 3.2.1.23) (see protein)
    38% identity, 71% coverage of query (671 bits)

AAX48919.1 β-galactosidase (Gal4214-1) (EC 3.2.1.23) (see protein)
    36% identity, 74% coverage of query (662 bits)

CAC50563.1 β-galactosidase (Lac;OLGA313) (EC 3.2.1.23) (see protein)
    35% identity, 73% coverage of query (653 bits)

CAA04267.1 β-galactosidase (BgaM) (EC 3.2.1.23) (see protein)
bgaM / CAA04267.1 beta-galactosidase from Bacillus megaterium (see paper)
    37% identity, 70% coverage of query (653 bits)

ACO52514.1 β-galactosidase (partial) (EC 3.2.1.23) (see protein)
    36% identity, 72% coverage of query (648 bits)

ABN13675.1 β-galactosidase (EC 3.2.1.23) (see protein)
    36% identity, 72% coverage of query (642 bits)

O85167 beta-galactosidase (EC 3.2.1.23) from Priestia megaterium (see paper)
    36% identity, 70% coverage of query (624 bits)

3bgaA / Q8A799 Crystal structure of beta-galactosidase from bacteroides thetaiotaomicron vpi-5482
    34% identity, 72% coverage of query (572 bits)

BAA76741.1 β-galactosidase Z (LacZ) (EC 3.2.1.23) (see protein)
    34% identity, 71% coverage of query (570 bits)

EbgA / b3076 evolved β-D-galactosidase subunit α from Escherichia coli K-12 substr. MG1655 (see 2 papers)
BGA2_ECOLI / P06864 Evolved beta-galactosidase subunit alpha; Beta-gal; Lactase; EC 3.2.1.23 from Escherichia coli (strain K12) (see paper)
    32% identity, 72% coverage of query (536 bits)

AAA61971.1 evolved β-galactosidase (EbgA;b3076) (EC 3.2.1.23) (see protein)
    32% identity, 72% coverage of query (533 bits)

Q7WTU5 beta-galactosidase (EC 3.2.1.23) from Arthrobacter sp. (see paper)
AAQ19029.1 β-galactosidase (LacZ) (EC 3.2.1.23) (see protein)
    31% identity, 70% coverage of query (465 bits)

ACI41243.1 β-galactosidase (BgaS) (EC 3.2.1.23) (see protein)
    30% identity, 70% coverage of query (465 bits)

AAB17954.1 β-galactosidase (LacZ) (EC 3.2.1.23) (see protein)
    30% identity, 70% coverage of query (460 bits)

Build an alignment

Build an alignment for 352820 and 16 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory