Searching for up to 100 curated homologs for 353115 FitnessBrowser__Btheta:353115 (438 a.a.)
Found high-coverage hits (≥70%) to 10 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
SO3503 N-acetyl glucosamine transporter, NagP from Shewanella oneidensis MR-1
TC 2.A.1.7.8 / Q8EBL0 N-acetylglucosamine porter, NagP from Shewanella oneidensis (see paper)
38% identity, 99% coverage of query (298 bits)
Shewana3_3110 N-acetylglucosamine transporter nagP from Shewanella sp. ANA-3
38% identity, 98% coverage of query (296 bits)
TC 2.A.1.7.2 / P0C105 Glucose/galactose porter from Brucella abortus (see paper)
30% identity, 98% coverage of query (205 bits)
N515DRAFT_1918 fructose porter FruP from Dyella japonica UNC79MFTsu3.2
31% identity, 98% coverage of query (195 bits)
FucP / b2801 L-fucose:H+ symporter from Escherichia coli K-12 substr. MG1655 (see 5 papers)
fucP / P11551 L-fucose:H+ symporter from Escherichia coli (strain K12) (see 13 papers)
FUCP_ECOLI / P11551 L-fucose-proton symporter; 6-deoxy-L-galactose permease; L-fucose permease; L-fucose-H(+) symport protein from Escherichia coli (strain K12) (see 6 papers)
TC 2.A.1.7.1 / P11551 L-Fucose:H+ symporter. The x-ray structure (3.1Å resolution) from Escherichia coli (see 8 papers)
31% identity, 97% coverage of query (169 bits)
Build an alignment for 353115 and 5 homologs with ≥ 30% identity
Or download the sequences
gluP / O25788 D-glucose/D-galactose/D-mannose:Na+ symporter from Helicobacter pylori (strain ATCC 700392 / 26695) (see 2 papers)
TC 2.A.1.7.7 / O25788 The Na+-dependent sugar transporter, HP1174 (transports glucose, galactose, mannose and 2-deoxyglucose (Psakis et al. 2009)). (most similar to 2.A.1.7.2; 49% identity) from Helicobacter pylori (see paper)
29% identity, 97% coverage of query (159 bits)
Sama_0562 D-mannose transporter (MFS superfamily) from Shewanella amazonensis SB2B
28% identity, 97% coverage of query (158 bits)
BT1277 L-fucose/D-arabinose symporter FucP from Bacteroides thetaiotaomicron VPI-5482
24% identity, 97% coverage of query (127 bits)
TC 2.A.1.7.5 / Q8XEV7 2-Deoxy-D-ribose porter, DeoP (see 2 papers)
26% identity, 97% coverage of query (116 bits)
BT1758 fructose transporter from Bacteroides thetaiotaomicron VPI-5482
24% identity, 94% coverage of query (59.3 bits)
Or start over
Lawrence Berkeley National Laboratory