Sites on a Tree

 

Searching for up to 100 curated homologs for 353245 FitnessBrowser__Btheta:353245 (360 a.a.)

Found high-coverage hits (≥70%) to 13 curated proteins.

Removed hits that are identical to the query, leaving 12

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) from Pedobacter sp. GW460-11-11-14-LB5
    54% identity, 99% coverage of query (382 bits)

Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) from Echinicola vietnamensis KMM 6221, DSM 17526
    50% identity, 98% coverage of query (369 bits)

2j5tD / P0A7B5 Glutamate 5-kinase from escherichia coli complexed with glutamate (see paper)
    31% identity, 97% coverage of query (187 bits)

ProB / b0242 glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
proB / P0A7B5 glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli (strain K12) (see 32 papers)
PROB_ECOLI / P0A7B5 Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli (strain K12) (see 3 papers)
P0A7B5 glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli (see 2 papers)
proB glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli K12 (see 6 papers)
    31% identity, 97% coverage of query (187 bits)

proB / BAA05044.1 gamma-glutamyl kinase from Bacillus subtilis (see paper)
    34% identity, 96% coverage of query (177 bits)

Q6E235 glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis (see paper)
    33% identity, 96% coverage of query (171 bits)

Build an alignment

Build an alignment for 353245 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

2j5vB / P0A7B5 Glutamate 5-kinase from escherichia coli complexed with glutamyl-5- phosphate and pyroglutamic acid (see paper)
    29% identity, 97% coverage of query (161 bits)

P9WHU9 glutamate 5-kinase (EC 2.7.2.11) from Mycobacterium tuberculosis (see paper)
    30% identity, 97% coverage of query (154 bits)

2j5vA Glutamate 5-kinase from escherichia coli complexed with glutamyl-5- phosphate and pyroglutamic acid
    28% identity, 97% coverage of query (154 bits)

YHJ3_YEAST / P38690 Uncharacterized protein YHR033W from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
    29% identity, 88% coverage of query (137 bits)

Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) from Sphingomonas koreensis DSMZ 15582
    32% identity, 87% coverage of query (135 bits)

PROB_YEAST / P32264 Glutamate 5-kinase; GK; Gamma-glutamyl kinase; EC 2.7.2.11 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
P32264 glutamate 5-kinase (EC 2.7.2.11) from Saccharomyces cerevisiae (see 5 papers)
    27% identity, 94% coverage of query (134 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory