Sites on a Tree

 

Searching for up to 100 curated homologs for 353292 FitnessBrowser__Btheta:353292 (269 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

Removed hits that are identical to the query, leaving 5

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

RhaD / B3902 rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Escherichia coli K-12 substr. MG1655 (see 19 papers)
rhaD / P32169 rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Escherichia coli (strain K12) (see 18 papers)
RHAD_ECOLI / P32169 Rhamnulose-1-phosphate aldolase; EC 4.1.2.19 from Escherichia coli (strain K12) (see 5 papers)
P32169 rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Escherichia coli (see 6 papers)
1gt7A / P32169 L-rhamnulose-1-phosphate aldolase from escherichia coli (see paper)
    32% identity, 90% coverage of query (124 bits)

2v9mA L-rhamnulose-1-phosphate aldolase from escherichia coli (mutant a87m- t109f-e192a)
    32% identity, 90% coverage of query (123 bits)

BWI76_RS00670 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Klebsiella michiganensis M5al
    31% identity, 90% coverage of query (122 bits)

1ojrA L-rhamnulose-1-phosphate aldolase from escherichia coli (mutant e192a)
    31% identity, 90% coverage of query (121 bits)

R4NQF0 rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Thermotoga maritima (see paper)
    32% identity, 90% coverage of query (116 bits)

Build an alignment

Build an alignment for 353292 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory