Searching for up to 100 curated homologs for 3606783 Dshi_0214 3-hydroxybutyryl-CoA dehydrogenase (RefSeq) (291 a.a.)
Found high-coverage hits (≥70%) to 82 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
HBD_BACSU / P45856 Probable 3-hydroxybutyryl-CoA dehydrogenase; Beta-hydroxybutyryl-CoA dehydrogenase; BHBD; EC 1.1.1.157 from Bacillus subtilis (strain 168) (see paper)
mmgB / GI|881605 3-hydroxybutyryl-CoA dehydrogenase from Bacillus subtilis (see paper)
54% identity, 97% coverage of query (328 bits)
hbd / P52041 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35) from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (see 2 papers)
HBD_CLOAB / P52041 3-hydroxybutyryl-CoA dehydrogenase; Beta-hydroxybutyryl-CoA dehydrogenase; BHBD; EC 1.1.1.157 from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (see paper)
hbd 3-hydroxybutyryl-CoA dehydrogenase; EC 1.1.1.157 from Clostridium acetobutylicum (see paper)
55% identity, 96% coverage of query (313 bits)
6aa8E / P52041 Crystal structure of (s)-3-hydroxybutyryl-coenzymea dehydrogenase from clostridium acetobutylicum complexed with NAD+ (see paper)
55% identity, 96% coverage of query (313 bits)
C4IEM5 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Clostridium butyricum (see 2 papers)
4kugA / C4IEM5 Crystal structure of 3-hydroxybutylryl-coa dehydrogenase with NAD from clostridium butyricum
52% identity, 96% coverage of query (302 bits)
4kuhA Crystal structure of 3-hydroxybutylryl-coa dehydrogenase with acetoacetyl-coa from clostridium butyricum
52% identity, 96% coverage of query (302 bits)
hbd / Q8RMI3 3-hydroxybutyryl-CoA dehydrogenase subunit (EC 1.1.1.35) from Clostridium beijerinckii (see 3 papers)
50% identity, 96% coverage of query (294 bits)
Q0KEY8 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Cupriavidus necator (see 2 papers)
51% identity, 97% coverage of query (289 bits)
mdpX / A2SP28 (S)-3-hydroxybutanoyl-CoA dehydrogeanse (EC 1.1.1.35) from Methylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1) (see 2 papers)
51% identity, 96% coverage of query (289 bits)
4pzdA / Q0KEY8 Crystal structure of (s)-3-hydroxybutyryl-coa dehydrogenase paah1 in complex with NAD+ (see paper)
51% identity, 96% coverage of query (286 bits)
4pzeA Crystal structure of (s)-3-hydroxybutyryl-coa dehydrogenase paah1 in complex with acetoacetyl-coa
51% identity, 96% coverage of query (286 bits)
A0A0E3GR61 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) from Clostridium scatologenes (see paper)
49% identity, 96% coverage of query (283 bits)
HBD_SYNWW / Q0AVM2 3-hydroxybutyryl-CoA dehydrogenase; EC 1.1.1.35 from Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) (see paper)
49% identity, 95% coverage of query (280 bits)
P34439 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Caenorhabditis elegans (see 2 papers)
43% identity, 97% coverage of query (225 bits)
Tfu_2399 / Q47M90 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Thermobifida fusca (strain YX) (see 3 papers)
40% identity, 97% coverage of query (225 bits)
gdnD / K4JH65 L-seryl-[seryl-carrier protein] dehydrogenase from Streptomyces sp. K01-0509 (see 2 papers)
43% identity, 97% coverage of query (224 bits)
FADB2_MYCTU / P9WNP7 3-hydroxybutyryl-CoA dehydrogenase; Beta-hydroxybutyryl-CoA dehydrogenase; BHBD; EC 1.1.1.157 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 3 papers)
P9WNP7 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Mycobacterium tuberculosis (see paper)
42% identity, 96% coverage of query (215 bits)
D3RXI4 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) from Ferroglobus placidus (see paper)
38% identity, 99% coverage of query (211 bits)
YdbU / b1395 3-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
paaH / P76083 3-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) from Escherichia coli (strain K12) (see 3 papers)
PAAH_ECOLI / P76083 3-hydroxyadipyl-CoA dehydrogenase; EC 1.1.1.- from Escherichia coli (strain K12) (see 4 papers)
41% identity, 98% coverage of query (211 bits)
clbD / Q0P7J4 L-seryl-[peptidyl-carrier protein] 3-dehydrogenase ClbD from Escherichia coli (see paper)
41% identity, 96% coverage of query (209 bits)
1f12A / Q16836 L-3-hydroxyacyl-coa dehydrogenase complexed with 3-hydroxybutyryl-coa (see paper)
41% identity, 97% coverage of query (209 bits)
HADH / Q16836 short-chain 3-hydroxyacyl-CoA dehydrogenase monomer (EC 1.1.1.35) from Homo sapiens (see 12 papers)
HCDH_HUMAN / Q16836 Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial; HCDH; Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase; Short-chain 3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35 from Homo sapiens (Human) (see 5 papers)
41% identity, 97% coverage of query (209 bits)
1f17A L-3-hydroxyacyl-coa dehydrogenase complexed with nadh
41% identity, 97% coverage of query (209 bits)
1f0yA L-3-hydroxyacyl-coa dehydrogenase complexed with acetoacetyl-coa and NAD+
41% identity, 97% coverage of query (209 bits)
HCDH_PIG / P00348 Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial; HCDH; L-3-hydroxyacyl CoA dehydrogenase; Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase; Short-chain 3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35 from Sus scrofa (Pig) (see 3 papers)
41% identity, 97% coverage of query (207 bits)
HCDH_MOUSE / Q61425 Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial; HCDH; Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase; Short-chain 3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35 from Mus musculus (Mouse) (see 2 papers)
40% identity, 97% coverage of query (204 bits)
zmaG / Q7BQ74 D-glyceryl/L-seryl-[acp] dehydrogenase from Bacillus cereus (see 2 papers)
36% identity, 96% coverage of query (192 bits)
dcaH / AAL09091.1 DcaH from Acinetobacter baylyi (see 11 papers)
38% identity, 97% coverage of query (185 bits)
paaH2 / Q0KCM8 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (see paper)
35% identity, 96% coverage of query (182 bits)
HP15_2693 3-hydroxyacyl-CoA dehydrogenase PaaC (EC 1.1.1.-) from Marinobacter adhaerens HP15
36% identity, 98% coverage of query (178 bits)
HP15_1512 Enoyl-CoA hydratase (EC 4.2.1.17) from Marinobacter adhaerens HP15
36% identity, 97% coverage of query (174 bits)
Msed_0399 / A4YDS4 crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2) (see 3 papers)
A4YDS4 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula (see 2 papers)
38% identity, 95% coverage of query (172 bits)
Q88L88 long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211) from Pseudomonas putida (see paper)
35% identity, 96% coverage of query (171 bits)
6iunB / Q0KBG3 Crystal structure of enoyl-coa hydratase (ech) from ralstonia eutropha h16 in complex with NAD
36% identity, 97% coverage of query (163 bits)
fkbK / Q9KIE3 D-glyceryl-[acp] dehydrogenase from Streptomyces hygroscopicus subsp. ascomyceticus (see 3 papers)
37% identity, 95% coverage of query (159 bits)
8oqsB / O53872 Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-83
34% identity, 96% coverage of query (159 bits)
1wdmA Fatty acid beta-oxidation multienzyme complex from pseudomonas fragi, form i (native3)
37% identity, 97% coverage of query (159 bits)
7o4uA Structure of the alpha subunit of mycobacterium tuberculosis beta- oxidation trifunctional enzyme in complex with oxidized nicotinamide adenine dinucleotide
34% identity, 96% coverage of query (159 bits)
8oqoA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-49
34% identity, 96% coverage of query (159 bits)
8oqlA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-1
34% identity, 96% coverage of query (159 bits)
4b3iA Crystal structure of mycobacterium tuberculosis fatty acid beta-oxidation complex with coenzymea bound at the hydratase active sites
34% identity, 96% coverage of query (159 bits)
8oqvA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-109
34% identity, 96% coverage of query (159 bits)
8pf8A Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-72
34% identity, 96% coverage of query (159 bits)
8oquA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-92
34% identity, 96% coverage of query (159 bits)
8oqtA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-91
34% identity, 96% coverage of query (159 bits)
8oqrA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-80
34% identity, 96% coverage of query (159 bits)
8oqnA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-53
34% identity, 96% coverage of query (159 bits)
8opvA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with resveratrol (fragment-b-h11)
34% identity, 96% coverage of query (159 bits)
8opuA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with sulfamethoxazole (fragment-b-e1)
34% identity, 96% coverage of query (159 bits)
FADB_PSEFR / P28793 Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Pseudomonas fragi (see 2 papers)
1wdlA / P28793 Fatty acid beta-oxidation multienzyme complex from pseudomonas fragi, form ii (native4) (see paper)
37% identity, 98% coverage of query (158 bits)
8oqqA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-79
34% identity, 96% coverage of query (158 bits)
8oqpA Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-76
34% identity, 96% coverage of query (158 bits)
fadB / Q88L02 FadB (EC 5.3.3.8; EC 1.1.1.35; EC 5.1.2.3; EC 4.2.1.17; EC 1.1.1.36) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 3 papers)
37% identity, 97% coverage of query (155 bits)
fadB / Q9HZJ2 fatty acid oxidation complex α subunit (EC 1.1.1.35; EC 4.2.1.74) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
37% identity, 97% coverage of query (154 bits)
asm13 / Q8KUG1 D-glyceryl-[acp] 3-dehydrogenase from Actinosynnema pretiosum subsp. auranticum (see 4 papers)
35% identity, 95% coverage of query (152 bits)
EHHADH / Q08426 peroxisomal bifunctional enzyme (EC 4.2.1.17; EC 1.1.1.35) from Homo sapiens (see 14 papers)
ECHP_HUMAN / Q08426 Peroxisomal bifunctional enzyme; PBE; PBFE; L-bifunctional protein; LBP; Multifunctional enzyme 1; MFE1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Homo sapiens (Human) (see 4 papers)
33% identity, 96% coverage of query (147 bits)
6tnmA / P21177 E. Coli aerobic trifunctional enzyme subunit-alpha (see paper)
34% identity, 90% coverage of query (146 bits)
OldB / b3846 multifunctional enoyl-CoA hydratase, 3-hydroxyacyl-CoA epimerase, Δ3-cis- Δ2-trans-enoyl-CoA isomerase, L-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35; EC 1.1.1.211; EC 4.2.1.17; EC 5.3.3.8; EC 5.1.2.3) from Escherichia coli K-12 substr. MG1655 (see 36 papers)
fadB / P21177 multifunctional enoyl-CoA hydratase, 3-hydroxyacyl-CoA epimerase, Δ3-cis- Δ2-trans-enoyl-CoA isomerase, L-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.17; EC 4.2.1.74; EC 5.3.3.8; EC 5.1.2.3) from Escherichia coli (strain K12) (see 36 papers)
FADB_ECOLI / P21177 Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Escherichia coli (strain K12) (see 5 papers)
34% identity, 90% coverage of query (146 bits)
Sama_0032 Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis SB2B
39% identity, 97% coverage of query (146 bits)
Shewana3_0024 Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella sp. ANA-3
38% identity, 97% coverage of query (145 bits)
MFP2 / Q9ZPI5 peroxisomal fatty acid β-oxidation multifunctional protein MFP2 (EC 1.1.1.35; EC 4.2.1.17) from Arabidopsis thaliana (see 4 papers)
MFP2_ARATH / Q9ZPI5 Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2; AtMPF2; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Arabidopsis thaliana (Mouse-ear cress) (see 7 papers)
Q9ZPI5 enoyl-CoA hydratase (EC 4.2.1.17) from Arabidopsis thaliana (see paper)
31% identity, 96% coverage of query (145 bits)
HADHA / P40939 mitochondrial trifunctional enzyme α subunit (EC 1.1.1.35; EC 4.2.1.17; EC 1.1.1.211) from Homo sapiens (see 5 papers)
ECHA_HUMAN / P40939 Trifunctional enzyme subunit alpha, mitochondrial; 78 kDa gastrin-binding protein; Monolysocardiolipin acyltransferase; TP-alpha; EC 2.3.1.-; EC 4.2.1.17; EC 1.1.1.211 from Homo sapiens (Human) (see 11 papers)
P40939 long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211) from Homo sapiens (see 6 papers)
31% identity, 97% coverage of query (144 bits)
pimF / Q6N3H7 6-carboxyhex-2-enoyl-CoA hydratase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) (see paper)
32% identity, 99% coverage of query (144 bits)
3zwaA / P07896 Crystal structure of rat peroxisomal multifunctional enzyme type 1 (rpmfe1) complexed with 3s-hydroxy-hexanoyl-coa (see paper)
32% identity, 96% coverage of query (143 bits)
ECHP_RAT / P07896 Peroxisomal bifunctional enzyme; PBE; PBFE; Multifunctional enzyme 1; MFE1; Multifunctional protein 1; MFP1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Rattus norvegicus (Rat) (see 4 papers)
P07896 enoyl-CoA hydratase (EC 4.2.1.17) from Rattus norvegicus (see paper)
Ehhadh / RF|NP_598290.1 noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35; EC 4.2.1.17; EC 5.3.3.8 from Rattus norvegicus (see paper)
32% identity, 96% coverage of query (143 bits)
3zw9A Crystal structure of rat peroxisomal multifunctional enzyme type 1 (rpmfe1) complexed with (2s,3s)-3-hydroxy-2- methylbutanoyl-coa
32% identity, 96% coverage of query (143 bits)
5omoA Crystal structure of rat peroxisomal multifunctional enzyme type-1 (rpmfe1) complexed with with 3s-hydroxy-decanoyl-coa and 3-keto- decanoyl-coa
32% identity, 96% coverage of query (143 bits)
5mgbA Crystal structure of rat peroxisomal multifunctional enzyme type-1 (rpmfe1) complexed with acetoacetyl-coa and NAD
32% identity, 96% coverage of query (143 bits)
3zwcA Crystal structure of rat peroxisomal multifunctional enzyme type 1 (rpmfe1) complexed with 3s-hydroxy-decanoyl-coa
32% identity, 96% coverage of query (143 bits)
2x58A The crystal structure of mfe1 liganded with coa
32% identity, 96% coverage of query (143 bits)
3zwbA Crystal structure of rat peroxisomal multifunctional enzyme type 1 (rpmfe1) complexed with 2trans-hexenoyl-coa
32% identity, 96% coverage of query (143 bits)
6yswA / P77399 E. Coli anaerobic trifunctional enzyme subunit-alpha in complex with coenzyme a
34% identity, 91% coverage of query (140 bits)
6zibAAA structure of rat peroxisomal multifunctional enzyme type-1 (rpmfe1) complexed with acetoacetyl-coa and nadh'
32% identity, 96% coverage of query (140 bits)
6zicAAA structure of rat peroxisomal multifunctional enzyme type-1 (rpmfe1) complexed with 3s-hydroxybutanoyl-coa and nadh'
32% identity, 96% coverage of query (140 bits)
6z5oAAA Peroxisomal bifunctional enzyme
32% identity, 96% coverage of query (139 bits)
Build an alignment for 3606783 and 74 homologs with ≥ 30% identity
Or download the sequences
3k6jA / O17762 Crystal structure of the dehydrogenase part of multifuctional enzyme 1 from c.Elegans
27% identity, 97% coverage of query (118 bits)
4dydA / B1P3E1 Substrate-directed dual catalysis of dicarbonyl compounds by diketoreductase (see paper)
30% identity, 96% coverage of query (112 bits)
mlr6793 / Q988C8 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase monomer (EC 1.2.1.100) from Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (see 3 papers)
FHMCD_RHILO / Q988C8 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase; FHMPC dehydrogenase; EC 1.2.1.100 from Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (Mesorhizobium loti (strain MAFF 303099)) (see 2 papers)
Q988C8 4-pyridoxic acid dehydrogenase (EC 1.1.99.42); 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylic acid 5-dehydrogenase (EC 1.2.1.100) from Mesorhizobium japonicum (see paper)
4om8A / Q988C8 Crystal structure of 5-formly-3-hydroxy-2-methylpyridine 4-carboxylic acid (fhmpc) 5-dehydrogenase, an NAD+ dependent dismutase. (see paper)
27% identity, 97% coverage of query (110 bits)
LCDH_PSESP / D7URM0 L-carnitine dehydrogenase; CDH; L-CDH; EC 1.1.1.108 from Pseudomonas sp. (see paper)
27% identity, 75% coverage of query (79.7 bits)
3f3sA / Q9Y2S2 The crystal structure of human lambda-crystallin, cryl1
27% identity, 78% coverage of query (67.8 bits)
CRYL1_HUMAN / Q9Y2S2 Lambda-crystallin homolog; L-gulonate 3-dehydrogenase; Gul3DH; EC 1.1.1.45 from Homo sapiens (Human) (see 2 papers)
27% identity, 78% coverage of query (67.4 bits)
3adpA / P14755 Crystal structure of the rabbit l-gulonate 3-dehydrogenase (nadh form)
26% identity, 77% coverage of query (53.9 bits)
CRYL1_RABIT / P14755 Lambda-crystallin; L-gulonate 3-dehydrogenase; Gul3DH; EC 1.1.1.45 from Oryctolagus cuniculus (Rabbit) (see paper)
P14755 L-gulonate 3-dehydrogenase (EC 1.1.1.45) from Oryctolagus cuniculus (see paper)
26% identity, 77% coverage of query (53.5 bits)
Or start over
Lawrence Berkeley National Laboratory