Sites on a Tree

 

Searching for up to 100 curated homologs for 3608476 FitnessBrowser__Dino:3608476 (422 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

No hits had 30% identity

Change minimum %identity:

Additional hits (identity < 30%)

sndH / Q402A8 L-sorbosone dehydrogenase 1 from Ketogulonicigenium vulgare (see paper)
    28% identity, 97% coverage of query (121 bits)

hcuB / BAC81751.1 hydrophobic compound transport factor from Pseudomonas aeruginosa (see paper)
    27% identity, 97% coverage of query (115 bits)

YliI / b0837 aldose sugar dehydrogenase YliI from Escherichia coli K-12 substr. MG1655 (see 5 papers)
yliI / P75804 aldose sugar dehydrogenase YliI from Escherichia coli (strain K12) (see 5 papers)
YLII_ECOLI / P75804 Aldose sugar dehydrogenase YliI; Asd; Soluble aldose sugar dehydrogenase YliI; EC 1.1.5.- from Escherichia coli (strain K12) (see 2 papers)
    26% identity, 100% coverage of query (111 bits)

2g8sA / P75804 Crystal structure of the soluble aldose sugar dehydrogenase (asd) from escherichia coli in the apo-form (see paper)
    26% identity, 93% coverage of query (107 bits)

7cdyA Crystal structure of glucose dehydrogenase
    28% identity, 89% coverage of query (105 bits)

7cgzA Glucose dehydrogenase
    26% identity, 89% coverage of query (97.4 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory