Searching for up to 100 curated homologs for 3608608 FitnessBrowser__Dino:3608608 (414 a.a.)
Found high-coverage hits (≥70%) to 48 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
XylR / VIMSS85562 XylR regulator of Xylose utilization, effector Xylose (repressor) from Mesorhizobium loti MAFF303099
33% identity, 79% coverage of query (174 bits)
XylR / VIMSS6926953 XylR regulator of Xylose utilization, effector Xylose (repressor) from Paenibacillus sp. JDR-2
31% identity, 90% coverage of query (173 bits)
XylR / VIMSS1781991 XylR regulator of Xylose utilization, effector Xylose (repressor) from Mesorhizobium sp. BNC1
33% identity, 79% coverage of query (163 bits)
Build an alignment for 3608608 and 3 homologs with ≥ 30% identity
Or download the sequences
5f7qE / Q8YAF1 Rok repressor lmo0178 from listeria monocytogenes bound to operator (see paper)
27% identity, 91% coverage of query (154 bits)
XylR / VIMSS317479 XylR regulator of Xylose utilization, effector Xylose (repressor) from Bradyrhizobium japonicum USDA 110
34% identity, 79% coverage of query (154 bits)
XylR / P70928_BACLI Transcription factor XylR (repressor) from Bacillus licheniformis Gibson 46 (see paper)
27% identity, 94% coverage of query (152 bits)
Q8R8N4 ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus subsp. tengcongensis (see paper)
30% identity, 73% coverage of query (152 bits)
XylR / VIMSS854293 XylR regulator of Xylose utilization, effector Xylose (repressor) from Geobacillus kaustophilus HTA426
31% identity, 79% coverage of query (152 bits)
XylR / VIMSS730014 XylR regulator of Xylose utilization, effector Xylose (repressor) from Bacillus licheniformis DSM 13
27% identity, 94% coverage of query (150 bits)
NagC / VIMSS4630820 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Moritella sp. PE36
28% identity, 78% coverage of query (149 bits)
XylR / VIMSS279908 XylR regulator of Xylose utilization, effector Xylose (repressor) from Oceanobacillus iheyensis HTE831
30% identity, 79% coverage of query (148 bits)
XylR / VIMSS65339 XylR regulator of Xylose utilization, effector Xylose (repressor) from Bacillus halodurans C-125
28% identity, 79% coverage of query (146 bits)
NagC / VIMSS3566654 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Aeromonas salmonicida subsp. salmonicida A449
29% identity, 85% coverage of query (145 bits)
NagC / b0676 DNA-binding transcriptional dual regulator NagC from Escherichia coli K-12 substr. MG1655 (see 14 papers)
NAGC_ECOLI / P0AF20 N-acetylglucosamine repressor from Escherichia coli (strain K12) (see paper)
NagC / P0AF20 Transcription factor NagC (activator/repressor) from Escherichia coli K12 MG1655 (see 3 papers)
nagC / SP|P0AF20 N-acetylglucosamine repressor from Escherichia coli K12 (see paper)
30% identity, 78% coverage of query (139 bits)
NagC / VIMSS7700176 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Tolumonas auensis DSM 9187
30% identity, 91% coverage of query (139 bits)
NagC / VIMSS339340 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (activator/repressor) from Vibrio parahaemolyticus RIMD 2210633
29% identity, 78% coverage of query (137 bits)
1z05A / Q9KQJ1 Crystal structure of the rok family transcriptional regulator, homolog of e.Coli mlc protein.
30% identity, 78% coverage of query (137 bits)
rokA / Q5GBH5 glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis (see 2 papers)
29% identity, 74% coverage of query (137 bits)
CelQ / VIMSS2059852 CelQ regulator of Cellobiose utilization, effector Cellobiose-6-phosphate (repressor) from Streptococcus sanguinis SK36
26% identity, 92% coverage of query (137 bits)
5f7rA Rok repressor lmo0178 from listeria monocytogenes bound to inducer
27% identity, 74% coverage of query (135 bits)
XylR / VIMSS822024 XylR regulator of Xylose utilization, effector Xylose (repressor) from Bacillus clausii KSM-K16
28% identity, 80% coverage of query (134 bits)
XylR / P16557 Transcription factor XylR (repressor) from Bacillus subtilis 168 (see 2 papers)
25% identity, 75% coverage of query (134 bits)
NanR / VIMSS6110394 NanR regulator of Sialic acid utilization; N-acetylglucosamine utilization, effector N-acetylglucosamine; N-acetylneuraminic acid (repressor) from Bacteroides plebeius DSM 17135
24% identity, 87% coverage of query (129 bits)
XylR / VIMSS38296 XylR regulator of Xylose utilization, effector Xylose (repressor) from Bacillus subtilis subsp. subtilis str. 168
26% identity, 73% coverage of query (129 bits)
NagC / VIMSS1972937 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Psychromonas ingrahamii 37
26% identity, 84% coverage of query (127 bits)
Q8RDE9 glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus subsp. tengcongensis (see paper)
26% identity, 74% coverage of query (124 bits)
Mlc / b1594 DNA-binding transcriptional repressor Mlc from Escherichia coli K-12 substr. MG1655 (see 15 papers)
MLC_ECOLI / P50456 DNA-binding transcriptional repressor Mlc; Making large colonies protein; Membrane linked control from Escherichia coli (strain K12) (see 15 papers)
Mlc / P50456 Transcription factor Mlc (repressor) from Escherichia coli K12 MG1655 (see 4 papers)
mlc / RF|NP_416111.1 protein mlc from Escherichia coli K12 (see 7 papers)
28% identity, 78% coverage of query (124 bits)
NagC / VIMSS2859304 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Psychromonas sp. CNPT3
27% identity, 81% coverage of query (122 bits)
NagC / VIMSS548778 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (activator/repressor) from Photorhabdus luminescens TTO1
26% identity, 78% coverage of query (120 bits)
NagC / VIMSS2773935 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Reinekea sp. MED297
30% identity, 81% coverage of query (120 bits)
NanR / VIMSS3720738 NanR regulator of Sialic acid utilization; N-acetylglucosamine utilization, effector N-acetylglucosamine; N-acetylneuraminic acid (repressor) from Bacteroides vulgatus ATCC 8482
22% identity, 86% coverage of query (115 bits)
NanR / VIMSS6257414 NanR regulator of Sialic acid utilization; N-acetylglucosamine utilization, effector N-acetylglucosamine; N-acetylneuraminic acid (repressor) from Bacteroides eggerthii DSM 20697
21% identity, 91% coverage of query (111 bits)
IolR / VIMSS1300 IolR regulator of Inositol utilization (repressor) from Thermotoga maritima MSB8
26% identity, 79% coverage of query (111 bits)
IolR / VIMSS5474541 IolR regulator of Inositol utilization (repressor) from Thermotoga neapolitana DSM 4359
27% identity, 79% coverage of query (108 bits)
1z6rA / P50456 Crystal structure of mlc from escherichia coli (see paper)
26% identity, 78% coverage of query (108 bits)
XylR / VIMSS3426742 XylR regulator of Xylose utilization, effector Xylose (repressor) from Bacillus pumilus SAFR-032
28% identity, 75% coverage of query (105 bits)
XylR / VIMSS354812 XylR regulator of Xylose utilization, effector Xylose (repressor) from Enterococcus faecalis V583
25% identity, 75% coverage of query (105 bits)
XylR / VIMSS3676564 XylR regulator of Xylose utilization, effector Xylose; Glucose (repressor) from Thermotoga lettingae TMO
23% identity, 86% coverage of query (103 bits)
NagC / VIMSS79758 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Pasteurella multocida subsp. multocida str. Pm70
27% identity, 78% coverage of query (102 bits)
XylR / VIMSS10362834 XylR regulator of Xylose utilization, effector Xylose; Glucose (repressor) from Thermotoga naphthophila RKU-10
24% identity, 79% coverage of query (99.4 bits)
CelQ / VIMSS115991 CelQ regulator of Cellobiose utilization, effector Cellobiose-6-phosphate (repressor) from Streptococcus pneumoniae TIGR4
20% identity, 91% coverage of query (99.4 bits)
XylR / Q9WXW5_THEMA Transcription factor XylR (repressor) from Thermotoga maritima MSB8
23% identity, 79% coverage of query (99.0 bits)
glkA / CAA62003.1 glucokinase from Renibacterium salmoninarum (see 2 papers)
28% identity, 70% coverage of query (98.6 bits)
XylR / VIMSS6791371 XylR regulator of Xylose utilization, effector Xylose (repressor) from Rhizobium sp. NGR234
24% identity, 82% coverage of query (92.4 bits)
XylR / VIMSS132512 XylR regulator of Xylose utilization, effector Xylose (repressor) from Sinorhizobium meliloti 1021
25% identity, 86% coverage of query (90.9 bits)
XylR / VIMSS130011 XylR regulator of Xylose utilization, effector Xylose (repressor) from Agrobacterium tumefaciens C58
26% identity, 79% coverage of query (89.0 bits)
XylR / VIMSS2205864 XylR regulator of Xylose utilization, effector Xylose (repressor) from Rhizobium leguminosarum bv. viciae 3841
26% identity, 79% coverage of query (87.4 bits)
4db3A / Q8D9M7 1.95 angstrom resolution crystal structure of n-acetyl-d-glucosamine kinase from vibrio vulnificus.
25% identity, 71% coverage of query (77.8 bits)
Or start over
Lawrence Berkeley National Laboratory