Sites on a Tree

 

Searching for up to 100 curated homologs for 3608695 FitnessBrowser__Dino:3608695 (372 a.a.)

Found high-coverage hits (≥70%) to 44 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

4wbtA / Q92R63 Crystal structure of histidinol-phosphate aminotransferase from sinorhizobium meliloti in complex with pyridoxal-5'-phosphate
    56% identity, 97% coverage of query (363 bits)

hisC / P17731 histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis (strain 168) (see 4 papers)
    32% identity, 87% coverage of query (155 bits)

8bj3A / A0A072U7F9 Crystal structure of medicago truncatula histidinol-phosphate aminotransferase (hisn6) in complex with histidinol-phosphate (see paper)
    31% identity, 86% coverage of query (147 bits)

AZOBR_RS20485 histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense Sp245
    31% identity, 89% coverage of query (140 bits)

PGA1_c25240 histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens BS107
    33% identity, 74% coverage of query (139 bits)

BPHYT_RS14905 Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans PsJN
    32% identity, 89% coverage of query (135 bits)

HIS6A_ARATH / B9DHD3 Histidinol-phosphate aminotransferase 1, chloroplastic; Gene duplicate 1-B protein; Imidazole acetol-phosphate transaminase; Protein EMBRYO DEFECTIVE 2196; Protein HISTIDINE BIOSYNTHESIS 6A; EC 2.6.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
    30% identity, 87% coverage of query (134 bits)

Build an alignment

Build an alignment for 3608695 and 7 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

HP15_2427 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Marinobacter adhaerens HP15
    29% identity, 95% coverage of query (133 bits)

HIS8_TOBAC / O82030 Histidinol-phosphate aminotransferase, chloroplastic; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Nicotiana tabacum (Common tobacco) (see paper)
O82030 histidinol-phosphate transaminase (EC 2.6.1.9) from Nicotiana tabacum (see paper)
    30% identity, 87% coverage of query (130 bits)

DVU1029 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris Hildenborough JW710
    31% identity, 88% coverage of query (130 bits)

HIS8_NICPL / Q9FEW2 Histidinol-phosphate aminotransferase, chloroplastic; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco) (see paper)
    30% identity, 87% coverage of query (130 bits)

4r2nA / P9WML5 Crystal structure of rv3772 in complex with its substrate (see paper)
    33% identity, 94% coverage of query (126 bits)

4r5zA Crystal structure of rv3772 encoded aminotransferase
    33% identity, 94% coverage of query (126 bits)

Pf6N2E2_3251 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens FW300-N2E2
    29% identity, 95% coverage of query (122 bits)

DvMF_0908 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris Miyazaki F
    31% identity, 85% coverage of query (122 bits)

HIS8_ZYMMO / P34037 Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) (see paper)
    30% identity, 83% coverage of query (121 bits)

hisH / AAC41445.1 imidazole acetol phosphate aminotransferase from Zymomonas mobilis (see paper)
    30% identity, 83% coverage of query (120 bits)

PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida KT2440
    27% identity, 93% coverage of query (113 bits)

Psest_3297 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri RCH2
    28% identity, 95% coverage of query (111 bits)

HIS8_CALS4 / Q8R5Q4 Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis) (see paper)
Q8R5Q4 histidine transaminase (EC 2.6.1.38) from Caldanaerobacter subterraneus subsp. tengcongensis (see paper)
    26% identity, 90% coverage of query (105 bits)

3cq5B / Q9KJU4 Histidinol-phosphate aminotransferase from corynebacterium glutamicum in complex with pmp (see paper)
    29% identity, 85% coverage of query (105 bits)

3cq6A Histidinol-phosphate aminotransferase from corynebacterium glutamicum holo-form (plp covalently bound )
    29% identity, 85% coverage of query (105 bits)

orf2651 / A0A0D3RBW0 tryptophan—pyruvate aminotransferase (EC 2.6.1.99) from Streptomyces griseus (see 2 papers)
    28% identity, 96% coverage of query (99.8 bits)

P9WML7 histidinol-phosphate transaminase (EC 2.6.1.9) from Mycobacterium tuberculosis (see 3 papers)
    30% identity, 79% coverage of query (98.2 bits)

4r8dA / P9WML7 Crystal structure of rv1600 encoded aminotransferase in complex with plp-mes from mycobacterium tuberculosis
    30% identity, 79% coverage of query (98.2 bits)

3ly1D / Q6D4Z0 Crystal structure of putative histidinol-phosphate aminotransferase (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a resolution
    28% identity, 94% coverage of query (97.4 bits)

C1437_CAMJE / Q0P8H7 Dihydroxyacetone phosphate transaminase Cj1437c; Capsule polysaccharide biosynthesis protein Cj1437c; PLP-dependent transaminase Cj1437; EC 2.6.1.- from Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) (see paper)
    25% identity, 88% coverage of query (92.8 bits)

ptaA / Q9I0V2 pyoverdine aminotransferase from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
    28% identity, 88% coverage of query (86.7 bits)

7szpA / A6TBC4 Crystal structure of histidinol-phosphate aminotransferase from klebsiella pneumoniae subsp. Pneumoniae (strain hs11286)
    27% identity, 81% coverage of query (84.3 bits)

BT0202 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Bacteroides thetaiotaomicron VPI-5482
    24% identity, 77% coverage of query (81.6 bits)

1fg3A / P06986 Crystal structure of l-histidinol phosphate aminotransferase complexed with l-histidinol (see paper)
    27% identity, 78% coverage of query (78.6 bits)

HisC / b2021 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
hisC / P06986 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli (strain K12) (see 5 papers)
HIS8_ECOLI / P06986 Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli (strain K12) (see 3 papers)
    27% identity, 78% coverage of query (78.6 bits)

1fg7A Crystal structure of l-histidinol phosphate aminotransferase with pyridoxal-5'-phosphate
    27% identity, 78% coverage of query (78.6 bits)

1geyA Crystal structure of histidinol-phosphate aminotransferase complexed with n-(5'-phosphopyridoxyl)-l-glutamate
    27% identity, 77% coverage of query (77.8 bits)

MmCobD / Q8PVB1 MmCobD (EC 4.1.1.81; EC 2.7.1.177) from Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (see 2 papers)
Q8PVB1 threonine-phosphate decarboxylase (EC 4.1.1.81) from Methanosarcina mazei (see paper)
    24% identity, 81% coverage of query (68.9 bits)

AAT_THEMA / Q9X0Y2 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
    23% identity, 85% coverage of query (62.4 bits)

1o4sB / Q9X0Y2 Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
    23% identity, 85% coverage of query (62.0 bits)

aruH / Q9HUI9 L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
ARUH_PSEAE / Q9HUI9 Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
Q9HUI9 arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa (see paper)
    28% identity, 76% coverage of query (58.9 bits)

S1544_SULMK / P0DV65 L-serine phosphate decarboxylase; CobD homolog SMUL_1544; SmCobD; L-serine O-phosphate decarboxylase; L-Ser-P decarboxylase; Norcobamide biosynthesis protein SMUL_1544; Threonine phosphate decarboxylase-like enzyme; EC 4.1.1.- from Sulfurospirillum multivorans (strain DM 12446 / JCM 15788 / NBRC 109480) (see 2 papers)
    24% identity, 76% coverage of query (56.2 bits)

Q8YY14 aspartate transaminase (EC 2.6.1.1) from Nostoc sp. (see paper)
    24% identity, 71% coverage of query (56.2 bits)

PAT_PETHY / E9L7A5 Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; PhPPA-AT; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Petunia hybrida (Petunia) (see 2 papers)
    26% identity, 90% coverage of query (55.5 bits)

Q8YMS6 aspartate transaminase (EC 2.6.1.1) from Nostoc sp. (see paper)
    26% identity, 76% coverage of query (53.9 bits)

5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v
    25% identity, 75% coverage of query (50.1 bits)

5wmhA Arabidopsis thaliana prephenate aminotransferase
    25% identity, 75% coverage of query (50.1 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory