Sites on a Tree


Searching for up to 100 curated homologs for 3610515 FitnessBrowser__Dino:3610515 (240 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

A0A2H4PJM1 gluconate 2-dehydrogenase (subunit 3/3) (EC from Pseudomonas plecoglossicida (see paper)
    38% identity, 70% coverage of query (101 bits)

gadh3 / O34213 gluconate 2-dehydrogenase subunit 3 (EC from Pantoea cypripedii (see paper)
GADH3_PANCY / O34213 Gluconate 2-dehydrogenase subunit 3; GA 2-DH subunit 3; GADH subunit 3; EC from Pantoea cypripedii (Pectobacterium cypripedii) (Erwinia cypripedii) (see paper)
    32% identity, 73% coverage of query (60.8 bits)

Build an alignment

Build an alignment for 3610515 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory