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Searching for up to 100 curated homologs for 5208465 FitnessBrowser__PV4:5208465 (428 a.a.)

Found high-coverage hits (≥70%) to 16 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AO356_21495 gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens FW300-N2C3
    77% identity, 100% coverage of query (693 bits)

Pf6N2E2_80 gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens FW300-N2E2
    79% identity, 92% coverage of query (654 bits)

YcjA / b1301 γ-glutamylputrescine oxidase from Escherichia coli K-12 substr. MG1655 (see 6 papers)
puuB / P37906 γ-glutamylputrescine oxidase from Escherichia coli (strain K12) (see 4 papers)
PUUB_ECOLI / P37906 Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli (strain K12) (see paper)
puuB / BAD88709.1 gamma-glutamylputrescine oxidase from Escherichia coli K-12 (see paper)
    63% identity, 99% coverage of query (567 bits)

Q1XEP4 taurine dehydrogenase (EC 1.4.99.2) from Paracoccus versutus (see paper)
    32% identity, 98% coverage of query (161 bits)

Q6RH53 taurine dehydrogenase (EC 1.4.99.2) from Paracoccus pantotrophus (see paper)
    32% identity, 98% coverage of query (158 bits)

Q6RH44 taurine dehydrogenase (EC 1.4.99.2) from Paracoccus pantotrophus (see paper)
    32% identity, 98% coverage of query (145 bits)

Q6RH61 taurine dehydrogenase (EC 1.4.99.2) from Paracoccus denitrificans (see paper)
    31% identity, 98% coverage of query (140 bits)

Build an alignment

Build an alignment for 5208465 and 7 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

amaA / Q88CC4 pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 3 papers)
    28% identity, 89% coverage of query (137 bits)

nmpC / A0A222FYP8 4-methylaminobutanoate oxidase (EC 1.5.3.21) from Alicycliphilus sp. (see paper)
    28% identity, 96% coverage of query (134 bits)

Q8U022 proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus (see paper)
    22% identity, 80% coverage of query (62.0 bits)

7cyxA / Q81HQ7 Crystal strcuture of glycine oxidase from bacillus cereus atcc 14579 (see paper)
    22% identity, 83% coverage of query (60.1 bits)

Q76M73 proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus (see 2 papers)
    23% identity, 80% coverage of query (51.6 bits)

tynA / D7F5L6 tyramine oxidase subunit A (EC 1.4.3.4) from Pseudomonas putida (see paper)
    23% identity, 86% coverage of query (50.8 bits)

Q5JFG2 proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis (see paper)
    22% identity, 80% coverage of query (50.1 bits)

GLYOX_BACLI / S5FMM4 Glycine oxidase; GO; BliGO; EC 1.4.3.19 from Bacillus licheniformis (see paper)
S5FMM4 glycine oxidase (EC 1.4.3.19) from Bacillus licheniformis (see paper)
    23% identity, 81% coverage of query (48.5 bits)

Q5JFG7 proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis (see paper)
    22% identity, 85% coverage of query (48.1 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory