Searching for up to 100 curated homologs for 5208944 FitnessBrowser__PV4:5208944 (212 a.a.)
Found high-coverage hits (≥70%) to 5 curated proteins.
Removed hits that are identical to the query, leaving 4
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
Sama_2210 alpha-ketoglutarate TRAP transporter, small permease component from Shewanella amazonensis SB2B
67% identity, 100% coverage of query (303 bits)
Build an alignment for 5208944 and 1 homologs with ≥ 30% identity
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DCTQ_PSEAE / Q9HU17 C4-dicarboxylate TRAP transporter small permease protein DctQ from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
25% identity, 94% coverage of query (84.7 bits)
Psest_4269 C4-dicarboxylate transporter, DctQ subunit from Pseudomonas stutzeri RCH2
26% identity, 94% coverage of query (80.9 bits)
DCTQ_RHOCA / O07837 C4-dicarboxylate TRAP transporter small permease protein DctQ from Rhodobacter capsulatus (Rhodopseudomonas capsulata) (see 2 papers)
TC 2.A.56.1.1 / O07837 DctQ, component of Tripartite dicarboxylate:H+ symporter (substrates include: fumarate, D- and L-malate, succinate, succinamide, orotate, iticonate and mesaconate) from Rhodobacter capsulatus (Rhodopseudomonas capsulata) (see 2 papers)
26% identity, 97% coverage of query (72.8 bits)
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Lawrence Berkeley National Laboratory