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Searching for up to 100 curated homologs for 5210088 FitnessBrowser__PV4:5210088 (267 a.a.)

Found high-coverage hits (≥70%) to 17 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Sama_0794 gamma-glutamyl-gamma-aminobutyrate hydrolase (EC: 3.5.1.94) from Shewanella amazonensis SB2B
    71% identity, 94% coverage of query (384 bits)

AO356_13140 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens FW300-N2C3
    41% identity, 93% coverage of query (199 bits)

7d50B / Q9I6J4 Spua mutant - h221n with glutamyl-thioester (see paper)
    42% identity, 89% coverage of query (195 bits)

7d53A Spua mutant - h221n with glu
    42% identity, 89% coverage of query (195 bits)

SO1267 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) from Shewanella oneidensis MR-1
    40% identity, 90% coverage of query (189 bits)

Pf6N2E2_4510 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens FW300-N2E2
    42% identity, 88% coverage of query (189 bits)

BWI76_RS10705 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) from Klebsiella michiganensis M5al
    42% identity, 91% coverage of query (185 bits)

AO353_29305 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens FW300-N2E3
    40% identity, 93% coverage of query (180 bits)

Sama_2645 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Shewanella amazonensis SB2B
    39% identity, 84% coverage of query (175 bits)

YcjL / b1298 γ-glutamyl-γ-aminobutyrate hydrolase (EC 3.5.1.94) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
puuD / P76038 γ-glutamyl-γ-aminobutyrate hydrolase (EC 3.5.1.94) from Escherichia coli (strain K12) (see 4 papers)
PUUD_ECOLI / P76038 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD; Gamma-Glu-GABA hydrolase; EC 3.5.1.94 from Escherichia coli (strain K12) (see 2 papers)
P76038 gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) from Escherichia coli K-12 (see paper)
puuD / GI|58197513 gamma-glutamyl-gamma-aminobutyrate hydrolase; EC 3.5.1.94 from Escherichia coli K12 (see 4 papers)
puuD / BAD88706.1 gamma-glutamyl-gamma-aminobutyrate hydrolase from Escherichia coli K-12 (see paper)
    38% identity, 92% coverage of query (174 bits)

6vtvB / P76038 Crystal structure of puud gamma-glutamyl-gamma-aminobutyrate hydrolase from e. Coli
    38% identity, 92% coverage of query (174 bits)

7d4rB / Q9I6J4 Spua native structure (see paper)
    38% identity, 89% coverage of query (166 bits)

YHE5_SCHPO / Q9HDV0 Putative glutamine amidotransferase PB2B2.05 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    39% identity, 88% coverage of query (134 bits)

GT121_ARATH / Q8H0Z4 Putative glutamine amidotransferase GAT1_2.1; Class I glutamine amidotransferase; GAT1_2 domain-containing protein 1; EC 2.4.2.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
    31% identity, 88% coverage of query (127 bits)

O33341 Putative glutamine amidotransferase Rv2859c; EC 2.4.2.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
    37% identity, 88% coverage of query (127 bits)

3fijA / Q92AL3 Crystal structure of a uncharacterized protein lin1909
    36% identity, 88% coverage of query (119 bits)

Build an alignment

Build an alignment for 5210088 and 16 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

3uowA Crystal structure of pf10_0123, a gmp synthetase from plasmodium falciparum
    25% identity, 73% coverage of query (52.0 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory