Sites on a Tree

 

Searching for up to 100 curated homologs for 5210578 FitnessBrowser__PV4:5210578 (189 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

lldF / Q8EGS6 L-lactate dehydrogenase LldF subunit (EC 1.1.2.3) from Shewanella oneidensis (strain MR-1) (see paper)
    77% identity, 100% coverage of query (300 bits)

Build an alignment

Build an alignment for 5210578 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

BPHYT_RS26965 L-lactate dehydrogenase, LldG subunit from Burkholderia phytofirmans PsJN
    26% identity, 98% coverage of query (64.7 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory