Sites on a Tree

 

Searching for up to 100 curated homologs for 5210708 FitnessBrowser__PV4:5210708 (934 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

dld-II / Q8EGS3 D-lactate dehydrogenase Dld-II (EC 1.1.2.5) from Shewanella oneidensis (strain MR-1) (see paper)
    82% identity, 100% coverage of query (1613 bits)

Q88DT2 D-2-hydroxyacid dehydrogenase (quinone) (EC 1.1.5.10); D-lactate dehydrogenase (quinone) (EC 1.1.5.12) from Pseudomonas putida (see paper)
    43% identity, 98% coverage of query (778 bits)

PfGW456L13_5118 D-lactate dehydrogenase (quinone), FeS subunit (EC 1.1.5.12) from Pseudomonas fluorescens GW456-L13
    43% identity, 99% coverage of query (768 bits)

GYD1 / A8J2E9 glycolate dehydrogenase (EC 1.1.99.14) from Chlamydomonas reinhardtii (see 4 papers)
    39% identity, 99% coverage of query (693 bits)

Build an alignment

Build an alignment for 5210708 and 4 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory