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Searching for up to 100 curated homologs for 5211333 FitnessBrowser__PV4:5211333 (738 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

YgjK / b3080 glycoside hydrolase from Escherichia coli K-12 substr. MG1655 (see 5 papers)
ygjK / P42592 glycoside hydrolase from Escherichia coli (strain K12) (see 3 papers)
YGJK_ECOLI / P42592 Glucosidase YgjK; EC 3.2.1.- from Escherichia coli (strain K12) (see paper)
AAA57881.1 α-glucosidase (YgjK;EcYgjK;b3080) (EC 3.2.1.20|3.2.1.84) (see protein)
ACB04164.1 ECDH10B_3255 (EC 3.2.1.20|3.2.1.84) (see protein)
BAE77130.1 ECK3070:JW3051:b3080 (YgjK) (EC 3.2.1.20|3.2.1.84) (see protein)
ygjK / RF|NP_417551 uncharacterized protein ygjK from Escherichia coli K12 (see 2 papers)
    36% identity, 99% coverage of query (442 bits)

3w7uA Escherichia coli k12 ygjk complexed with galactose
    36% identity, 96% coverage of query (435 bits)

3w7tA Escherichia coli k12 ygjk complexed with mannose
    36% identity, 96% coverage of query (435 bits)

3w7sA Escherichia coli k12 ygjk complexed with glucose
    36% identity, 96% coverage of query (435 bits)

5gw7B / P42592 Crystal structure of the glycosynthase mutant e727a of escherichia coli gh63 glycosidase in complex with glucose and lactose (see paper)
    36% identity, 96% coverage of query (433 bits)

Build an alignment

Build an alignment for 5211333 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory