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Searching for up to 100 curated homologs for 58 a.a. (ERKRMRNRIA...) (58 a.a.)

Found high-coverage hits (≥70%) to 17 curated proteins.

Removed hits that are identical to the query, leaving 16

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

JUN_MOUSE / P05627 Transcription factor Jun; AH119; Activator protein 1; AP1; Proto-oncogene c-Jun; Transcription factor AP-1 subunit Jun; V-jun avian sarcoma virus 17 oncogene homolog; Jun A from Mus musculus (Mouse) (see 9 papers)
    98% identity, 100% coverage of query (112 bits)

JUN_RAT / P17325 Transcription factor Jun; Activator protein 1; AP1; Proto-oncogene c-Jun; Transcription factor AP-1 subunit Jun; V-jun avian sarcoma virus 17 oncogene homolog from Rattus norvegicus (Rat) (see 3 papers)
    98% identity, 100% coverage of query (112 bits)

JUN_HUMAN / P05412 Transcription factor Jun; Activator protein 1; AP1; Proto-oncogene c-Jun; Transcription factor AP-1 subunit Jun; V-jun avian sarcoma virus 17 oncogene homolog; p39 from Homo sapiens (Human) (see 30 papers)
    98% identity, 100% coverage of query (112 bits)

JUN_CHICK / P18870 Transcription factor Jun; Proto-oncogene c-Jun; Transcription factor AP-1 subunit Jun from Gallus gallus (Chicken) (see paper)
    98% identity, 100% coverage of query (111 bits)

JUND_HUMAN / P17535 Transcription factor JunD; Transcription factor AP-1 subunit JunD from Homo sapiens (Human) (see 3 papers)
    86% identity, 100% coverage of query (101 bits)

JUND_MOUSE / P15066 Transcription factor JunD; Transcription factor AP-1 subunit JunD from Mus musculus (Mouse) (see paper)
    86% identity, 100% coverage of query (101 bits)

5vpeD / P17535 Transcription factor fosb/jund bzip domain in complex with cognate DNA, type-i crystal (see paper)
    86% identity, 100% coverage of query (97.4 bits)

JUNB_MOUSE / P09450 Transcription factor JunB; MyD21; Transcription factor AP-1 subunit JunB from Mus musculus (Mouse) (see paper)
    79% identity, 100% coverage of query (96.3 bits)

JUNB_HUMAN / P17275 Transcription factor JunB; Transcription factor AP-1 subunit JunB from Homo sapiens (Human) (see paper)
    81% identity, 100% coverage of query (91.3 bits)

JRA_DROME / P18289 Transcription factor Jra; Jun-related antigen; Transcription factor AP-1 subunit Jra; dJRA; dJun from Drosophila melanogaster (Fruit fly) (see 4 papers)
    66% identity, 100% coverage of query (77.8 bits)

Jun / CAA73154.1 Jun from Drosophila melanogaster (see 2 papers)
    62% identity, 100% coverage of query (75.1 bits)

ATF7_MOUSE / Q8R0S1 Cyclic AMP-dependent transcription factor ATF-7; cAMP-dependent transcription factor ATF-7; Activating transcription factor 7; Transcription factor ATF-A from Mus musculus (Mouse) (see 5 papers)
    40% identity, 100% coverage of query (44.3 bits)

atfA AtfA from Emericella nidulans (see 2 papers)
    43% identity, 84% coverage of query (43.9 bits)

ATF7_HUMAN / P17544 Cyclic AMP-dependent transcription factor ATF-7; cAMP-dependent transcription factor ATF-7; Activating transcription factor 7; Transcription factor ATF-A from Homo sapiens (Human) (see 10 papers)
    51% identity, 86% coverage of query (41.6 bits)

1t2kD / P15336 Structure of the DNA binding domains of irf3, atf-2 and jun bound to DNA (see paper)
    43% identity, 91% coverage of query (41.2 bits)

BACH2_HUMAN / Q9BYV9 Transcription regulator protein BACH2; BTB and CNC homolog 2 from Homo sapiens (Human) (see 3 papers)
    40% identity, 90% coverage of query (40.4 bits)

Build an alignment

Build an alignment for 58 and 16 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory