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Searching for up to 100 curated homologs for 59 a.a. (MKVKSAAKKR...) (59 a.a.)

Found high-coverage hits (≥70%) to 14 curated proteins.

Removed hits that are identical to the query, leaving 13

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

RL35_BACSU / P55874 Large ribosomal subunit protein bL35; 50S ribosomal protein L35 from Bacillus subtilis (strain 168) (see paper)
    58% identity, 100% coverage of query (64.7 bits)

8buu3 / P55874 8buu3 (see paper)
    58% identity, 100% coverage of query (64.3 bits)

8uu97 / A0A660JIB9 8uu97 (see paper)
    53% identity, 100% coverage of query (62.0 bits)

5nrg3 / Q2FXQ0 The crystal structure of the large ribosomal subunit of staphylococcus aureus in complex with rb02 (see paper)
    56% identity, 100% coverage of query (58.9 bits)

8p2f8 50S ribosomal protein L35
    56% identity, 100% coverage of query (58.9 bits)

5ngmA3 structure of the 70S ribosome composing the S. aureus 100S complex
    56% identity, 100% coverage of query (58.9 bits)

5myjB7 / A2RMR2 of 70S ribosome from Lactococcus lactis (see paper)
    52% identity, 92% coverage of query (50.4 bits)

8cd15 / Q9I0A1 8cd15 (see paper)
    49% identity, 93% coverage of query (45.1 bits)

7unu7 50S ribosomal protein L35
    49% identity, 93% coverage of query (45.1 bits)

7nhk7 / A0A1B4XM73 7nhk7 (see paper)
    51% identity, 80% coverage of query (42.0 bits)

8a3l2 / P0A7Q1 8a3l2 (see paper)
    46% identity, 88% coverage of query (40.4 bits)

4v9pA3 50S ribosomal protein L35
    46% identity, 88% coverage of query (40.4 bits)

7f0d3 / A5U2Z9 Cryo-em structure of mycobacterium tuberculosis 50s ribosome subunit bound with clarithromycin (see paper)
    40% identity, 98% coverage of query (40.4 bits)

Build an alignment

Build an alignment for 59 and 13 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory