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Searching for up to 100 curated homologs for 6938637 FitnessBrowser__SB2B:6938637 (441 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 2.A.26.1.1 / P19072 Branched chain amino acid: Na+ symporter from Pseudomonas aeruginosa (see 2 papers)
    47% identity, 96% coverage of query (358 bits)

TC 2.A.26.1.2 / P25185 Ile/Val:H+ symporter from Pseudomonas aeruginosa (see 2 papers)
    41% identity, 98% coverage of query (320 bits)

BRNQ_SALTY / P0A1W8 Branched-chain amino acid permease BrnQ; BCAA permease; Branched-chain amino acid transport system 2 carrier protein; LIV-II from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    40% identity, 99% coverage of query (308 bits)

HrbA / b0401 branched chain amino acid transporter BrnQ from Escherichia coli K-12 substr. MG1655 (see 4 papers)
brnQ / P0AD99 branched chain amino acid transporter BrnQ from Escherichia coli (strain K12) (see 8 papers)
BRNQ_ECOLI / P0AD99 Branched-chain amino acid permease BrnQ; BCAA permease; Branched-chain amino acid transport system 2 carrier protein; LIV-II from Escherichia coli (strain K12) (see 3 papers)
TC 2.A.26.1.10 / P0AD99 Branched chain amino acid transporter 2 of 439 aas and 12 TMSs, BrnQ from Escherichia coli (strain K12)
    39% identity, 99% coverage of query (308 bits)

BRAB_BACSU / O34545 Branched-chain amino acid permease BraB; BCAA permease; Branched-chain amino acid transport system carrier protein BraB; Branched-chain amino acid uptake carrier BraB from Bacillus subtilis (strain 168) (see 2 papers)
    40% identity, 98% coverage of query (297 bits)

BRNQ_BACSU / P94499 Branched-chain amino acid permease BrnQ; BCAA permease; Branched-chain amino acid transport system carrier protein BrnQ; Branched-chain amino acid uptake carrier BrnQ from Bacillus subtilis (strain 168) (see paper)
    39% identity, 98% coverage of query (290 bits)

BRNQ_LACDL / P54104 Branched-chain amino acid permease BrnQ; BCAA permease; Branched-chain amino acid transport system carrier protein; Branched-chain amino acid uptake carrier from Lactobacillus delbrueckii subsp. lactis (see paper)
TC 2.A.26.1.3 / P54104 Branched chain amino acid:H+ symporter from Lactobacillus delbrueckii (subsp. lactis) (see paper)
brnQ / CAA88595.1 branched-chain amino acid carrier from Lactobacillus delbrueckii (see paper)
    35% identity, 99% coverage of query (251 bits)

TC 2.A.26.1.9 / F2HK99 Branched chain amino acid (Leucine, Isoleucine, Valine) transporter of 456 aas and 12 TMSs, BrnQ from Lactococcus lactis subsp. lactis (strain CV56)
    35% identity, 97% coverage of query (239 bits)

BRNQ_LACLM / A2RJ04 Branched-chain amino acid permease BrnQ; BCAA permease; Branched-chain amino acid transport system carrier protein from Lactococcus lactis subsp. cremoris (strain MG1363) (see paper)
    36% identity, 97% coverage of query (223 bits)

BRNQ_CORGL / O06754 Branched-chain amino acid permease BrnQ; BCAA permease; Branched-chain amino acid transport system carrier protein; Branched-chain amino acid uptake carrier from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) (see paper)
    32% identity, 99% coverage of query (177 bits)

Build an alignment

Build an alignment for 6938637 and 10 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Additional hits (identity < 30%)

TC 2.A.26.1.4 / O84558 The branched chain amino acid transporter BrnQ (transports Leu, Ile, Val, Phe, and Met) from Chlamydia trachomatis (see paper)
    27% identity, 89% coverage of query (89.7 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory