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Searching for up to 100 curated homologs for 7024891 FitnessBrowser__ANA3:7024891 (231 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

Removed hits that are identical to the query, leaving 10

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Echvi_0503 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Echinicola vietnamensis KMM 6221, DSM 17526
    60% identity, 99% coverage of query (295 bits)

CA265_RS08620 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Pedobacter sp. GW460-11-11-14-LB5
    55% identity, 99% coverage of query (263 bits)

YjfX / b4198 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
ulaF / P39306 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli (strain K12) (see paper)
ULAF_ECOLI / P39306 L-ribulose-5-phosphate 4-epimerase UlaF; L-ascorbate utilization protein F; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 3 papers)
    51% identity, 97% coverage of query (262 bits)

AraD / b0061 L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 19 papers)
araD / P08203 L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli (strain K12) (see 18 papers)
ARAD_ECOLI / P08203 L-ribulose-5-phosphate 4-epimerase AraD; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 11 papers)
araD / GB|BAB96630.1 L-ribulose-5-phosphate 4-epimerase; EC 5.1.3.4 from Escherichia coli K12 (see paper)
    52% identity, 97% coverage of query (240 bits)

ARAD_BACSU / P94525 L-ribulose-5-phosphate 4-epimerase; Phosphoribulose isomerase; EC 5.1.3.4 from Bacillus subtilis (strain 168) (see paper)
    49% identity, 97% coverage of query (233 bits)

YiaS / b3583 L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
sgbE / P37680 L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli (strain K12) (see 3 papers)
SGBE_ECOLI / P37680 L-ribulose-5-phosphate 4-epimerase SgbE; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 2 papers)
    49% identity, 97% coverage of query (232 bits)

1jdiA / P08203 Crystal structure of l-ribulose-5-phosphate 4-epimerase (see paper)
    50% identity, 94% coverage of query (226 bits)

C4B4W3 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Corynebacterium glutamicum (see paper)
    37% identity, 95% coverage of query (137 bits)

Build an alignment

Build an alignment for 7024891 and 8 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

MJ1418 / Q58813 fuculose-1-phosphate aldolase subunit (EC 4.1.2.17) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see paper)
FUCA_METJA / Q58813 L-fuculose phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 3 papers)
Q58813 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Methanocaldococcus jannaschii (see paper)
    26% identity, 85% coverage of query (57.4 bits)

6voqA / Q0QC76 Crystal structure of ygbl, a putative aldolase/epimerase/decarboxylase from klebsiella pneumoniae
    24% identity, 85% coverage of query (46.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory