Sites on a Tree

 

Searching for up to 100 curated homologs for 8499629 FitnessBrowser__Miya:8499629 (218 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

HP15_4090 L-lactate dehydrogenase, LutC subunit from Marinobacter adhaerens HP15
    50% identity, 83% coverage of query (170 bits)

RR42_RS21290 L-lactate dehydrogenase, LutC subunit from Cupriavidus basilensis FW507-4G11
    42% identity, 80% coverage of query (125 bits)

Q5F884 L-lactate dehydrogenase (subunit 2/3) (EC 1.1.1.27) from Neisseria gonorrhoeae (see paper)
    31% identity, 98% coverage of query (120 bits)

Build an alignment

Build an alignment for 8499629 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory