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Searching for up to 100 curated homologs for 8500375 FitnessBrowser__Miya:8500375 (392 a.a.)

Found high-coverage hits (≥70%) to 29 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

GLPA2_HALVD / D4GQU6 Anaerobic glycerol-3-phosphate dehydrogenase subunit A2; G-3-P dehydrogenase A2; G3PDH A2; EC 1.1.5.3 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
    41% identity, 97% coverage of query (252 bits)

GLPA1_HALVD / D4GYI2 Anaerobic glycerol-3-phosphate dehydrogenase subunit A1; G-3-P dehydrogenase A1; G3PDH A1; EC 1.1.5.3 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
    41% identity, 95% coverage of query (251 bits)

GlpA / b2241 anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) from Escherichia coli K-12 substr. MG1655 (see 10 papers)
glpA / P0A9C0 anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) from Escherichia coli (strain K12) (see 8 papers)
    39% identity, 93% coverage of query (248 bits)

Build an alignment

Build an alignment for 8500375 and 3 homologs with ≥ 30% identity

Select sequences

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Change minimum %identity:

Additional hits (identity < 30%)

GPD2 / P43304 mitochondrial glycerol-3-phosphate dehydrogenase subunit (EC 1.1.5.3) from Homo sapiens (see 8 papers)
GPDM_HUMAN / P43304 Glycerol-3-phosphate dehydrogenase, mitochondrial; GPD-M; GPDH-M; mitohondrial glycerophosphate dehydrogenase gene; mGDH; mtGPD; EC 1.1.5.3 from Homo sapiens (Human) (see paper)
P43304 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) from Homo sapiens (see 2 papers)
    28% identity, 96% coverage of query (108 bits)

Q64521 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) from Mus musculus (see 3 papers)
    28% identity, 96% coverage of query (98.2 bits)

P35571 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) from Rattus norvegicus (see 4 papers)
    28% identity, 96% coverage of query (98.2 bits)

L7T8Y9 glycine oxidase (EC 1.4.3.19) from Bacillus cereus (see 2 papers)
    27% identity, 89% coverage of query (84.0 bits)

AT3g10370 / Q9SS48 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) from Arabidopsis thaliana (see paper)
SDP6_ARATH / Q9SS48 Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; Protein SUGAR-DEPENDENT 6; EC 1.1.5.3 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    25% identity, 97% coverage of query (82.0 bits)

Q8U1G2 proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus (see paper)
    25% identity, 91% coverage of query (78.6 bits)

7cyxA / Q81HQ7 Crystal strcuture of glycine oxidase from bacillus cereus atcc 14579 (see paper)
    27% identity, 89% coverage of query (75.1 bits)

1y56B / O59089 Crystal structure of l-proline dehydrogenase from p.Horikoshii (see paper)
    25% identity, 76% coverage of query (73.9 bits)

O59089 proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii (see paper)
    25% identity, 76% coverage of query (73.9 bits)

Q5JFG7 proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis (see paper)
    25% identity, 91% coverage of query (73.6 bits)

Q06B39 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) from Dunaliella salina (see paper)
    25% identity, 95% coverage of query (73.2 bits)

Q8U022 proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus (see paper)
    26% identity, 75% coverage of query (67.8 bits)

2rgoB / D0VWP7 Structure of alpha-glycerophosphate oxidase from streptococcus sp.: A template for the mitochondrial alpha-glycerophosphate dehydrogenase (see paper)
    23% identity, 91% coverage of query (65.5 bits)

2rgoA / D0VWP7 Structure of alpha-glycerophosphate oxidase from streptococcus sp.: A template for the mitochondrial alpha-glycerophosphate dehydrogenase (see paper)
    23% identity, 91% coverage of query (64.3 bits)

GLPD_BACSU / P18158 Aerobic glycerol-3-phosphate dehydrogenase; EC 1.1.5.3 from Bacillus subtilis (strain 168) (see paper)
    24% identity, 92% coverage of query (63.9 bits)

O59445 proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii (see paper)
    26% identity, 75% coverage of query (63.9 bits)

glpD / CAA74430.1 glycerol-3-phosphate dehydrogenase from Bacillus subtilis (see 3 papers)
    23% identity, 92% coverage of query (62.4 bits)

glpD / Q5HPP0 aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) from Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (see paper)
    24% identity, 88% coverage of query (57.0 bits)

glpO / O86963 glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus (see 3 papers)
GLPO_ENTCA / O86963 Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus (Enterococcus flavescens) (see paper)
    24% identity, 75% coverage of query (57.0 bits)

Q76M73 proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus (see 2 papers)
    26% identity, 81% coverage of query (56.2 bits)

SMc02520 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) from Sinorhizobium meliloti 1021
    24% identity, 91% coverage of query (51.6 bits)

3da1A / Q9KDW6 X-ray structure of the glycerol-3-phosphate dehydrogenase from bacillus halodurans complexed with fad. Northeast structural genomics consortium target bhr167.
    24% identity, 92% coverage of query (50.4 bits)

Q833L7 glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis (see paper)
    20% identity, 92% coverage of query (50.4 bits)

eryB / Q2YIQ2 D-erythritol 1-phosphate dehydrogenase (EC 1.1.1.402) from Brucella abortus (strain 2308) (see 3 papers)
ERYB_BRUA2 / Q2YIQ2 D-erythritol 1-phosphate dehydrogenase; EC 1.1.1.402 from Brucella abortus (strain 2308) (see 3 papers)
    23% identity, 91% coverage of query (47.0 bits)

4yshA / Q5L2C2 Crystal structure of glycine oxidase from geobacillus kaustophilus
    25% identity, 75% coverage of query (45.8 bits)

4yshB Crystal structure of glycine oxidase from geobacillus kaustophilus
    25% identity, 75% coverage of query (45.8 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory