Sites on a Tree

 

Searching for up to 100 curated homologs for 8501786 FitnessBrowser__Miya:8501786 (425 a.a.)

Found high-coverage hits (≥70%) to 100 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

P30949 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) from Bacillus subtilis (see paper)
hemL / AAA22515.1 glutamate-1-semialdehyde 2,1-aminotransferase from Bacillus subtilis (see 2 papers)
    55% identity, 99% coverage of query (486 bits)

3bs8A / P30949 Crystal structure of glutamate 1-semialdehyde aminotransferase complexed with pyridoxamine-5'-phosphate from bacillus subtilis (see paper)
    55% identity, 99% coverage of query (484 bits)

hemL / CAD48149.1 glutamate-1-semialdehyde 2,1-aminotransferase from Bacillus megaterium (see paper)
    55% identity, 98% coverage of query (478 bits)

3k28A / Q81LD0 Crystal structure of a glutamate-1-semialdehyde aminotransferase from bacillus anthracis with bound pyridoxal 5'phosphate
    54% identity, 96% coverage of query (464 bits)

P24630 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) from Synechococcus sp. (see 2 papers)
    54% identity, 98% coverage of query (464 bits)

3fqaA Gabaculien complex of gabaculine resistant gsam version
    53% identity, 98% coverage of query (460 bits)

2gsaB Crystal structure of glutamate-1-semialdehyde aminomutase (aminotransferase, wild-type form)
    53% identity, 98% coverage of query (459 bits)

2gsaA Crystal structure of glutamate-1-semialdehyde aminomutase (aminotransferase, wild-type form)
    53% identity, 98% coverage of query (459 bits)

3fq7A / P24630 Gabaculine complex of gsam (see paper)
    53% identity, 98% coverage of query (458 bits)

3usfA Crystal structure of dava-4
    53% identity, 98% coverage of query (458 bits)

2hp2A Inter-subunit signaling in gsam
    53% identity, 98% coverage of query (458 bits)

2hp1A Inter-subunit signaling in gsam
    53% identity, 98% coverage of query (458 bits)

2hozA Inter-subunit signaling in gsam
    53% identity, 98% coverage of query (458 bits)

GSA2_ARATH / Q42522 Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic; GSA 2; Glutamate-1-semialdehyde aminotransferase 2; GSA-AT 2; EC 5.4.3.8 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
    53% identity, 99% coverage of query (453 bits)

GSA1 / P42799 glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) from Arabidopsis thaliana (see paper)
GSA1_ARATH / P42799 Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic; AtGSA1; GSA 1; Glutamate-1-semialdehyde aminotransferase 1; GSA-AT 1; EC 5.4.3.8 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
P42799 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) from Arabidopsis thaliana (see paper)
    53% identity, 99% coverage of query (452 bits)

5hdmA / P42799 Crystal structure of arabidopsis thaliana glutamate-1-semialdehyde-2, 1-aminomutase (see paper)
    53% identity, 99% coverage of query (451 bits)

5hdmB Crystal structure of arabidopsis thaliana glutamate-1-semialdehyde-2, 1-aminomutase
    53% identity, 99% coverage of query (451 bits)

6w80A / B2FT35 Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from stenotrophomonas maltophilia k279a in complex with plp
    54% identity, 98% coverage of query (449 bits)

hemL / P0CL07 glutamate-1-semialdehyde 2,1-aminomutase subunit (EC 5.4.3.8) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    53% identity, 98% coverage of query (444 bits)

Gsa / b0154 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) from Escherichia coli K-12 substr. MG1655 (see 20 papers)
hemL / P23893 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) from Escherichia coli (strain K12) (see 19 papers)
GSA_ECOLI / P23893 Glutamate-1-semialdehyde 2,1-aminomutase; GSA; Glutamate-1-semialdehyde aminotransferase; GSA-AT; EC 5.4.3.8 from Escherichia coli (strain K12) (see 3 papers)
    53% identity, 98% coverage of query (442 bits)

5i92F / P48247 Crystal structure of glutamate-1-semialdehyde 2,1- aminomutase (gsa) from pseudomonas aeruginosa
    51% identity, 98% coverage of query (418 bits)

3usfB / Q31QJ2 Crystal structure of dava-4
    49% identity, 98% coverage of query (413 bits)

2e7uA / Q5SJS4 Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from thermus thermophilus hb8
    50% identity, 98% coverage of query (410 bits)

2hp1B Inter-subunit signaling in gsam
    49% identity, 98% coverage of query (408 bits)

hemL / BAA21914.1 glutamate 1-semialdehyde 2,1-aminomutase from Propionibacterium freudenreichii (see 2 papers)
    51% identity, 96% coverage of query (385 bits)

2cfbA / Q8DLK8 Glutamate-1-semialdehyde 2,1-aminomutase from thermosynechococcus elongatus (see paper)
    51% identity, 91% coverage of query (382 bits)

Q8NT73 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) from Corynebacterium glutamicum (see paper)
    47% identity, 98% coverage of query (369 bits)

GSA_SACS2 / Q980U5 Glutamate-1-semialdehyde 2,1-aminomutase; GSA; Glutamate-1-semialdehyde aminotransferase; GSA-AT; EC 5.4.3.8 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see paper)
Q980U5 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) from Saccharolobus solfataricus (see paper)
    44% identity, 97% coverage of query (355 bits)

2zsmA / Q9Y9I9 Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from aeropyrum pernix, hexagonal form
    44% identity, 98% coverage of query (353 bits)

D1C218 beta-alanine-pyruvate transaminase (EC 2.6.1.18) from Sphaerobacter thermophilus (see paper)
    34% identity, 97% coverage of query (243 bits)

6k8hB / D1C218 Crystal structure of an omega-transaminase from sphaerobacter thermophilus (see paper)
    34% identity, 97% coverage of query (243 bits)

2ykuA / A3EYF7 Structural determinants of the beta-selectivity of a bacterial aminotransferase (see paper)
    37% identity, 97% coverage of query (236 bits)

4ao4A Structural determinants of the beta-selectivity of a bacterial aminotransferase
    37% identity, 97% coverage of query (236 bits)

2ykyA Structural determinants of the beta-selectivity of a bacterial aminotransferase
    38% identity, 94% coverage of query (236 bits)

2ykxA Structural determinants of the beta-selectivity of a bacterial aminotransferase
    38% identity, 94% coverage of query (236 bits)

2ykvA Structural determinants of the beta-selectivity of a bacterial aminotransferase
    38% identity, 94% coverage of query (235 bits)

4zm4B / A8R0K5 Complex structure of pctv k276r mutant with pmp and 3-dehydroshkimate (see paper)
    37% identity, 95% coverage of query (234 bits)

4zm4D / A8R0K5 Complex structure of pctv k276r mutant with pmp and 3-dehydroshkimate (see paper)
    42% identity, 76% coverage of query (216 bits)

KAT_CLOAI / B0VH76 3-aminobutyryl-CoA aminotransferase; HemL-like protein; EC 2.6.1.111 from Cloacimonas acidaminovorans (strain Evry) (see paper)
B0VH76 3-aminobutanoyl-CoA transaminase (EC 2.6.1.111) from Candidatus Cloacimonas acidaminovorans (see paper)
    31% identity, 98% coverage of query (211 bits)

6ssdA Transaminase with plp bound (see paper)
    34% identity, 93% coverage of query (206 bits)

6ssgA Transaminase with dcs bound
    34% identity, 93% coverage of query (206 bits)

6ssfA Transaminase with lcs bound
    34% identity, 93% coverage of query (206 bits)

6sseA Transaminase with pmp bound
    34% identity, 93% coverage of query (206 bits)

MYCA_BACIU / Q9R9J1 Mycosubtilin synthase subunit A; EC 2.3.1.- from Bacillus subtilis (see paper)
    34% identity, 91% coverage of query (198 bits)

6kfuA / Q9R9J1 A acp-amt fusion protein of hybrid polyketide/non-ribosomal peptide synthetase
    34% identity, 91% coverage of query (195 bits)

6kfrA Amino-transferase (amt) domain - arg complex of hybrid polyketide/non- ribosomal peptide synthetase
    34% identity, 91% coverage of query (195 bits)

BFAT_VARPD / H8WR05 Beta-phenylalanine transaminase; Aromatic beta-amino acid aminotransferase; Beta-phenylalanine aminotransferase; VpAT; EC 2.6.1.- from Variovorax paradoxus (see paper)
H8WR05 tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus (see paper)
    34% identity, 96% coverage of query (194 bits)

4ao9A / H8WR05 Biochemical properties and crystal structure of a novel beta-phenylalanine aminotransferase from variovorax paradoxus (see paper)
    34% identity, 96% coverage of query (194 bits)

4aoaA Biochemical properties and crystal structure of a novel beta-phenylalanine aminotransferase from variovorax paradoxus
    34% identity, 96% coverage of query (194 bits)

bmyA / CAE11250.1 BmyA protein from Bacillus amyloliquefaciens (see paper)
    34% identity, 91% coverage of query (190 bits)

mxcL / Q9F631 myxocheline aldehyde aminotransferase from Stigmatella aurantiaca (see 2 papers)
    31% identity, 97% coverage of query (178 bits)

gdnH / K4JEW9 guadinomine polyketide synthase module 4 from Streptomyces sp. K01-0509 (see paper)
    33% identity, 91% coverage of query (176 bits)

YC7B_SCHPO / O94492 Uncharacterized aminotransferase C417.11c; EC 2.6.-.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    32% identity, 84% coverage of query (165 bits)

fumI / D2D3B2 aminopentol aminotransferase from Sphingopyxis macrogoltabida (see paper)
FUMI_SPHMC / D2D3B2 Aminopentol aminotransferase; EC 2.6.1.- from Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus) (see 2 papers)
    30% identity, 97% coverage of query (152 bits)

6hbvA / D2D3B2 Structure of plp internal aldimine form of sphingopyxis sp. Mta144 fumi protein
    30% identity, 97% coverage of query (152 bits)

Q9HWU0 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) from Pseudomonas aeruginosa (see paper)
    33% identity, 85% coverage of query (149 bits)

AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) from Pseudomonas fluorescens FW300-N2E3
    31% identity, 92% coverage of query (149 bits)

davT / Q9I6M4 5-aminovalerate aminotransferase (EC 2.6.1.48) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
DAVT_PSEAE / Q9I6M4 5-aminovalerate aminotransferase DavT; 5-aminovalerate transaminase; Delta-aminovalerate aminotransferase; EC 2.6.1.48 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
Q9I6M4 5-aminovalerate transaminase (EC 2.6.1.48) from Pseudomonas aeruginosa (see paper)
    32% identity, 92% coverage of query (147 bits)

gabT / Q4KKA1 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) (see paper)
    31% identity, 92% coverage of query (147 bits)

5yktA / Q9HWU0 Crystal structure of a glutamate-1-semialdehyde-aminomutase (k286a) from pseudomonas aeruginosa pao1 in complex with pmp (see paper)
    33% identity, 85% coverage of query (147 bits)

A0A3B6LSQ4 ornithine aminotransferase (EC 2.6.1.13) from Triticum aestivum (see paper)
    31% identity, 71% coverage of query (140 bits)

gabT / Q0K2K2 4-aminobutyrate aminotransferase monomer (EC 2.6.1.19) from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (see paper)
Q0K2K2 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Cupriavidus necator (see paper)
    33% identity, 88% coverage of query (139 bits)

Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) from Pseudomonas fluorescens FW300-N2E2
    30% identity, 92% coverage of query (139 bits)

GabT / b2662 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli K-12 substr. MG1655 (see 29 papers)
gabT / P22256 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli (strain K12) (see 28 papers)
GABT_ECOLI / P22256 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 from Escherichia coli (strain K12) (see 6 papers)
    32% identity, 74% coverage of query (139 bits)

A0A3B6MXE9 ornithine aminotransferase (EC 2.6.1.13) from Triticum aestivum (see paper)
    31% identity, 72% coverage of query (139 bits)

1sf2A / P22256 Structure of e. Coli gamma-aminobutyrate aminotransferase (see paper)
    32% identity, 74% coverage of query (139 bits)

1szkA The structure of gamma-aminobutyrate aminotransferase mutant: e211s
    32% identity, 74% coverage of query (139 bits)

1sffA Structure of gamma-aminobutyrate aminotransferase complex with aminooxyacetate
    32% identity, 74% coverage of query (139 bits)

DAVT_PSEPK / Q88RB9 5-aminovalerate aminotransferase DavT; 5-aminovalerate transaminase; Delta-aminovalerate aminotransferase; EC 2.6.1.48 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
Q88RB9 5-aminovalerate transaminase (EC 2.6.1.48) from Pseudomonas putida (see 2 papers)
    31% identity, 92% coverage of query (138 bits)

A0A3B6KM96 ornithine aminotransferase (EC 2.6.1.13) from Triticum aestivum (see paper)
    30% identity, 71% coverage of query (136 bits)

A0QYS9 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)
    33% identity, 74% coverage of query (131 bits)

Q5SHH5 [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
    33% identity, 74% coverage of query (128 bits)

1wkhA Acetylornithine aminotransferase from thermus thermophilus hb8
    32% identity, 74% coverage of query (126 bits)

1wkgA Acetylornithine aminotransferase from thermus thermophilus hb8
    32% identity, 74% coverage of query (126 bits)

1vefA / Q5SHH5 Acetylornithine aminotransferase from thermus thermophilus hb8
    32% identity, 74% coverage of query (126 bits)

4jevB / P40732 N-acetylornithine aminotransferase from s. Typhimurium complexed with gabaculine
    32% identity, 70% coverage of query (119 bits)

GoaG / b1302 4-aminobutyrate aminotransferase PuuE (EC 2.6.1.19; EC 2.6.1.48) from Escherichia coli K-12 substr. MG1655 (see 12 papers)
puuE / P50457 4-aminobutyrate aminotransferase PuuE (EC 2.6.1.19; EC 2.6.1.48) from Escherichia coli (strain K12) (see 11 papers)
PUUE_ECOLI / P50457 4-aminobutyrate aminotransferase PuuE; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; EC 2.6.1.19 from Escherichia coli (strain K12) (see 2 papers)
puuE / BAD88710.1 gamma-aminobutyrate aminotransferase from Escherichia coli K-12 (see paper)
    32% identity, 80% coverage of query (119 bits)

4jewA N-acetylornithine aminotransferase from s. Typhimurium complexed with l-canaline
    31% identity, 70% coverage of query (118 bits)

ARGD_SALTY / P40732 Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    32% identity, 70% coverage of query (117 bits)

2pb0A Structure of biosynthetic n-acetylornithine aminotransferase from salmonella typhimurium: studies on substrate specificity and inhibitor binding
    31% identity, 70% coverage of query (116 bits)

8ht4B / Q59282 Crystal structure of acetylornithine aminotransferase complex with plp from corynebacterium glutamicum
    31% identity, 72% coverage of query (114 bits)

4atqF / A1R958 Gaba-transaminase a1r958 in complex with external aldimine plp-gaba adduct (see paper)
    31% identity, 80% coverage of query (113 bits)

6gioC / Q06K28 Structure of amino acid amide racemase from ochrobactrum anthropi (see paper)
    32% identity, 70% coverage of query (111 bits)

Build an alignment

Build an alignment for 8501786 and 83 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

2ordA / Q9X2A5 Crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution
    27% identity, 77% coverage of query (111 bits)

Q9X2A5 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
    27% identity, 77% coverage of query (111 bits)

3q8nC / A0QQ04 Crystal structure of 4-aminobutyrate transaminase from mycobacterium smegmatis (see paper)
    31% identity, 79% coverage of query (110 bits)

pigE / A0A0J9X1Q5 (S)-3-acetyloctanal aminotransferase monomer from Serratia sp. (strain FS14) (see 4 papers)
PIGE_SERSF / A0A0J9X1Q5 Aminotransferase PigE; EC 2.6.1.- from Serratia sp. (strain FS14) (see paper)
    31% identity, 71% coverage of query (109 bits)

4ppmA / A0A0J9X1Q5 Crystal structure of pige: a transaminase involved in the biosynthesis of 2-methyl-3-n-amyl-pyrrole (map) from serratia sp. Fs14 (see paper)
    31% identity, 71% coverage of query (109 bits)

APTA_CAUVC / Q9A3Q9 Omega-aminotransferase; Beta-alanine--pyruvate aminotransferase; EC 2.6.1.-; EC 2.6.1.18 from Caulobacter vibrioides (strain ATCC 19089 / CB15) (Caulobacter crescentus) (see paper)
    31% identity, 71% coverage of query (108 bits)

5e3kB Crystal structure of the ornithine aminotransferase from toxoplasma gondii me49 in a complex with (s)-4-amino-5-fluoropentanoic acid
    29% identity, 72% coverage of query (105 bits)

5eqcA / S8EY38 Structure of the ornithine aminotransferase from toxoplasma gondii crystallized in presence of oxidized glutathione reveals partial occupancy of plp at the protein active site
    29% identity, 72% coverage of query (105 bits)

5e5iA Structure of the ornithine aminotransferase from toxoplasma gondii in complex with inactivator
    28% identity, 72% coverage of query (105 bits)

5dj9A Crystal structure of the ornithine aminotransferase from toxoplasma gondii me49 in a complex with gabaculine
    28% identity, 72% coverage of query (105 bits)

5e3kA Crystal structure of the ornithine aminotransferase from toxoplasma gondii me49 in a complex with (s)-4-amino-5-fluoropentanoic acid
    29% identity, 72% coverage of query (105 bits)

4b98A / Q9I700 The structure of the omega aminotransferase from pseudomonas aeruginosa (see paper)
    30% identity, 80% coverage of query (104 bits)

BAUA_PSEAE / Q9I700 Beta-alanine--pyruvate aminotransferase; Beta-A--Py AT; Beta-alanine--pyruvate transaminase; Omega-amino acid aminotransferase; Omega-amino acid AT; Omega-amino acid--pyruvate aminotransferase; Omega-APT; EC 2.6.1.18 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
    30% identity, 80% coverage of query (103 bits)

A0A0A7I435 taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum subsp. kashiwanohense (see paper)
6jixA / A0A0A7I435 The cyrstal structure of taurine:2-oxoglutarate aminotransferase from bifidobacterium kashiwanohense, in complex with plp and glutamate (see paper)
    32% identity, 71% coverage of query (103 bits)

5m49A Alpha-amino epsilon-caprolactam racemase in complex with plp and d/l alpha amino epsilon-caprolactam (internal aldimine)
    32% identity, 73% coverage of query (103 bits)

ASRAC_PYRHO / O58478 Alanine/serine racemase; ASR; Ala/Ser racemase; EC 5.1.1.-; EC 5.1.1.1 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see paper)
    27% identity, 76% coverage of query (103 bits)

4uhmA Characterization of a novel transaminase from pseudomonas sp. Strain aac (see paper)
    29% identity, 72% coverage of query (103 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory