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Searching for up to 100 curated homologs for AO353_07635 FitnessBrowser__pseudo3_N2E3:AO353_07635 (399 a.a.)

Found high-coverage hits (≥70%) to 31 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

FADH_PSEPU / P46154 Glutathione-independent formaldehyde dehydrogenase; FALDH; FDH; Formaldehyde dismutase; EC 1.2.1.46; EC 1.2.98.1 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 3 papers)
P46154 formaldehyde dehydrogenase (EC 1.2.1.46) from Pseudomonas putida (see paper)
    93% identity, 100% coverage of query (739 bits)

1kolA / P46154 Crystal structure of formaldehyde dehydrogenase (see paper)
    93% identity, 99% coverage of query (734 bits)

Q9HTE3 formaldehyde dehydrogenase (EC 1.2.1.46) from Pseudomonas aeruginosa (see paper)
    89% identity, 100% coverage of query (711 bits)

4jlwA Crystal structure of formaldehyde dehydrogenase from pseudomonas aeruginosa (see paper)
    90% identity, 99% coverage of query (704 bits)

YYCR_BACSU / Q45604 Uncharacterized zinc-type alcohol dehydrogenase-like protein YycR; EC 1.-.-.- from Bacillus subtilis (strain 168) (see paper)
    66% identity, 98% coverage of query (523 bits)

A0A6F8QRG1 formaldehyde dismutase (EC 1.2.98.1) from Methylobacterium sp. FD1 (see paper)
    58% identity, 98% coverage of query (464 bits)

A0A224AQI3 formaldehyde dismutase (EC 1.2.98.1) from Methylobacterium sp. FD1 (see 2 papers)
    55% identity, 98% coverage of query (446 bits)

FDM_PSEPU / Q52078 Formaldehyde dismutase; EC 1.2.98.1 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
    58% identity, 99% coverage of query (433 bits)

2dphA / Q52078 Crystal structure of formaldehyde dismutase
    58% identity, 99% coverage of query (431 bits)

YbdR / b0608 putative Zn2+-dependent alcohol dehydrogenase YbdR from Escherichia coli K-12 substr. MG1655 (see paper)
    35% identity, 94% coverage of query (179 bits)

ADHB_BACSU / O06012 Uncharacterized zinc-type alcohol dehydrogenase-like protein AdhB; EC 1.-.-.- from Bacillus subtilis (strain 168) (see paper)
    34% identity, 95% coverage of query (164 bits)

4cpdA / B2ZRE3 Alcohol dehydrogenase tadh from thermus sp. Atn1
    31% identity, 94% coverage of query (153 bits)

B2ZRE3 alcohol dehydrogenase (EC 1.1.1.1) from Thermus sp. (see paper)
    31% identity, 94% coverage of query (153 bits)

YHG1_SCHPO / Q9P6I8 Zinc-type alcohol dehydrogenase-like protein C1198.01; EC 1.-.-.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    30% identity, 94% coverage of query (150 bits)

Q9HMB6 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Halobacterium sp. (see paper)
    30% identity, 94% coverage of query (135 bits)

D4GP73 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii (see paper)
    30% identity, 94% coverage of query (127 bits)

Q5V676 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloarcula marismortui (see paper)
    30% identity, 94% coverage of query (122 bits)

gutB / Q06004 glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis (strain 168) (see paper)
DHSO_BACSU / Q06004 Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis (strain 168) (see paper)
gutB / GI|304153 L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis subsp. subtilis str. 168 (see 3 papers)
gutB / AAA22508.1 sorbitol dehydrogenase from Bacillus subtilis (see paper)
    31% identity, 71% coverage of query (100 bits)

Build an alignment

Build an alignment for AO353_07635 and 18 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

ADH_CUPNH / Q0KDL6 Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (Ralstonia eutropha) (see 2 papers)
    28% identity, 97% coverage of query (100 bits)

Q3C2L6 L-iditol 2-dehydrogenase (EC 1.1.1.14) from Solanum lycopersicum (see paper)
    27% identity, 75% coverage of query (95.5 bits)

6ffxA Crystal structure of r. Ruber adh-a, mutant f43h (see paper)
    28% identity, 87% coverage of query (72.4 bits)

5o9dA Crystal structure of r. Ruber adh-a, mutant y294f, w295a, y54f, f43h, h39y
    28% identity, 87% coverage of query (72.0 bits)

P12311 Alcohol dehydrogenase; ADH-T; EC 1.1.1.1 from Geobacillus stearothermophilus (Bacillus stearothermophilus)
    29% identity, 70% coverage of query (70.5 bits)

1vj0A / Q9WYR7 Crystal structure of alcohol dehydrogenase (tm0436) from thermotoga maritima at 2.00 a resolution
    25% identity, 84% coverage of query (69.3 bits)

7cyiD / A0A2U1Q018 Crystal structure of alcohol dehydrogenase 1 from artemisia annua
    27% identity, 73% coverage of query (60.5 bits)

6ljhA Crystal structure of alcohol dehydrogenase 1 from artemisia annua in complex with NAD+
    27% identity, 73% coverage of query (60.5 bits)

2cdaA Sulfolobus solfataricus glucose dehydrogenase 1 in complex with NADP
    23% identity, 74% coverage of query (53.5 bits)

2cdbA Sulfolobus solfataricus glucose dehydrogenase 1 in complex with NADP and glucose
    23% identity, 74% coverage of query (53.1 bits)

2cd9A / O93715 Sulfolobus solfataricus glucose dehydrogenase 1 - apo form (see paper)
    23% identity, 74% coverage of query (52.4 bits)

gdh / O93715 aldose 1-dehydrogenase subunit (EC 1.1.1.376; EC 1.1.1.359; EC 1.1.1.119) from Saccharolobus solfataricus (see 2 papers)
GLCDH_SACSO / O93715 Glucose 1-dehydrogenase; GDH; GlcDH; Aldose 1-dehydrogenase [NAD(P)(+)]; Galactose 1-dehydrogenase; EC 1.1.1.47; EC 1.1.1.359; EC 1.1.1.120; EC 1.1.1.48 from Saccharolobus solfataricus (Sulfolobus solfataricus) (see 3 papers)
Q7LYI9 aldose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.359) from Saccharolobus solfataricus (see paper)
    23% identity, 74% coverage of query (50.1 bits)

2cdcA Sulfolobus solfataricus glucose dehydrogenase 1 in complex with NADP and xylose
    23% identity, 74% coverage of query (48.5 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory