Searching for up to 100 curated homologs for AO353_09155 FitnessBrowser__pseudo3_N2E3:AO353_09155 (434 a.a.)
Found high-coverage hits (≥70%) to 29 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri RCH2
86% identity, 100% coverage of query (772 bits)
DADA1_PSEAE / Q9HTQ0 D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
Q9HTQ0 D-arginine dehydrogenase (EC 1.4.99.6) from Pseudomonas aeruginosa (see paper)
85% identity, 100% coverage of query (759 bits)
DadR / b1189 D-amino acid dehydrogenase (EC 1.4.5.1) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
dadA / P0A6J5 D-amino acid dehydrogenase (EC 1.4.5.1) from Escherichia coli (strain K12) (see 22 papers)
DADA_ECOLI / P0A6J5 D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli (strain K12) (see 4 papers)
dadA / AAC36880.1 D-amino acid dehydrogenase from Escherichia coli (see paper)
64% identity, 97% coverage of query (551 bits)
DADA_KLEAE / O30745 D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Klebsiella aerogenes (Enterobacter aerogenes) (see paper)
62% identity, 99% coverage of query (536 bits)
AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense Sp245
59% identity, 97% coverage of query (520 bits)
Ac3H11_4848 D-alanine dehydrogenase (EC 1.4.99.-) from Acidovorax sp. GW101-3H11
37% identity, 94% coverage of query (298 bits)
RR42_RS25930 glycine dehydrogenase (deaminating) (EC 1.4.1.10) from Cupriavidus basilensis FW507-4G11
32% identity, 94% coverage of query (204 bits)
dada* / AAB39269.1 dada* from Pseudomonas aeruginosa (see 2 papers)
31% identity, 90% coverage of query (115 bits)
Build an alignment for AO353_09155 and 8 homologs with ≥ 30% identity
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dadA / A3KEZ1 D-amino acid dehydrogenase (EC 1.4.5.1) from Helicobacter pylori (see paper)
DADA_HELPX / A3KEZ1 D-amino acid dehydrogenase; DAD; EC 1.4.5.1 from Helicobacter pylori (Campylobacter pylori) (see paper)
A3KEZ1 D-amino acid dehydrogenase (quinone) (EC 1.4.5.1); D-arginine dehydrogenase (EC 1.4.99.6) from Helicobacter pylori (see 2 papers)
24% identity, 89% coverage of query (108 bits)
amaD / Q88GX1 D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
26% identity, 93% coverage of query (104 bits)
GLYOX_PSEPK / Q88Q83 Glycine oxidase; GO; EC 1.4.3.19 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
Q88Q83 glycine oxidase (EC 1.4.3.19) from Pseudomonas putida (see paper)
29% identity, 91% coverage of query (93.6 bits)
lhpB / Q88NF6 D-hydroxyproline dehydrogenase subunit from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 2 papers)
25% identity, 89% coverage of query (90.5 bits)
6pxsA / Q11HA4 Crystal structure of iminodiacetate oxidase (idaa) from chelativorans sp. Bnc1 (see paper)
24% identity, 97% coverage of query (84.0 bits)
mabO / Q8GAI3 4-methylaminobutyrate oxidase (demethylating) (EC 1.5.3.19) from Paenarthrobacter nicotinovorans (see 2 papers)
MABO1_PAENI / Q8GAI3 4-methylaminobutanoate oxidase (formaldehyde-forming); MABO; Demethylating gamma-N-methylaminobutyrate oxidase; Gamma-N-methylaminobutyrate oxidase 1; EC 1.5.3.19 from Paenarthrobacter nicotinovorans (Arthrobacter nicotinovorans) (see 2 papers)
25% identity, 96% coverage of query (81.3 bits)
L7T8Y9 glycine oxidase (EC 1.4.3.19) from Bacillus cereus (see 2 papers)
24% identity, 92% coverage of query (70.5 bits)
7cyxA / Q81HQ7 Crystal strcuture of glycine oxidase from bacillus cereus atcc 14579 (see paper)
24% identity, 92% coverage of query (68.9 bits)
lhpB / Q9I477 D-hydroxyproline dehydrogenase β subunit from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
25% identity, 93% coverage of query (67.4 bits)
2gagB Heteroteterameric sarcosine: structure of a diflavin metaloenzyme at 1.85 a resolution
23% identity, 80% coverage of query (66.2 bits)
PDPR_BOVIN / O46504 Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial; PDPr from Bos taurus (Bovine) (see 2 papers)
23% identity, 96% coverage of query (65.9 bits)
soxB / P40875 sarcosine oxidase β subunit (EC 1.5.3.24) from Corynebacterium sp. (strain P-1) (see 3 papers)
TSOXB_CORS1 / P40875 Sarcosine oxidase subunit beta; Sarcosine oxidase subunit B; Sarcosine oxidase (5,10-methylenetetrahydrofolate-forming) subunit beta; Tetrameric sarcosine oxidase subunit beta; TSOX subunit beta; EC 1.5.3.24 from Corynebacterium sp. (strain P-1) (see 7 papers)
23% identity, 80% coverage of query (60.5 bits)
Q8NCN5 [pyruvate dehydrogenase (acetyl-transferring)]-phosphatase (EC 3.1.3.43) from Homo sapiens (see paper)
23% identity, 96% coverage of query (60.1 bits)
TSOXB_ARTSP / Q9AGP3 Sarcosine oxidase subunit beta; Sarcosine oxidase subunit B; Sarcosine oxidase (5,10-methylenetetrahydrofolate-forming) subunit beta; Tetrameric sarcosine oxidase subunit beta; TSOX subunit beta; EC 1.5.3.24 from Arthrobacter sp.
23% identity, 80% coverage of query (59.3 bits)
6j38A / X5IYZ1 Crystal structure of cmis2 (see paper)
26% identity, 74% coverage of query (59.3 bits)
6j39A Crystal structure of cmis2 with inhibitor
26% identity, 74% coverage of query (59.3 bits)
HCNC_PSEAE / G3XD12 Hydrogen cyanide synthase subunit HcnC; HcnC; Glycine dehydrogenase (cyanide-forming); EC 1.4.99.5 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 6 papers)
25% identity, 92% coverage of query (56.6 bits)
Q8U1G2 proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus (see paper)
20% identity, 76% coverage of query (53.9 bits)
dpdh / A1RVM8 D-proline dehydrogenase monomer (EC 1.5.99.13) from Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) (see paper)
DPDH_PYRIL / A1RVM8 D-proline dehydrogenase; D-Pro DH; D-Pro dehydrogenase; EC 1.5.99.13 from Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) (see 2 papers)
A1RVM8 D-proline dehydrogenase (EC 1.5.99.13) from Pyrobaculum islandicum (see paper)
25% identity, 94% coverage of query (53.5 bits)
O59089 proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii (see paper)
20% identity, 75% coverage of query (51.2 bits)
1y56B / O59089 Crystal structure of l-proline dehydrogenase from p.Horikoshii (see paper)
20% identity, 75% coverage of query (50.8 bits)
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Lawrence Berkeley National Laboratory