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Searching for up to 100 curated homologs for AO353_11640 FitnessBrowser__pseudo3_N2E3:AO353_11640 (269 a.a.)

Found high-coverage hits (≥70%) to 12 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

MetQ / b0197 L-methionine/D-methionine ABC transporter membrane anchored binding protein (EC 7.4.2.11) from Escherichia coli K-12 substr. MG1655 (see 7 papers)
metQ / P28635 L-methionine/D-methionine ABC transporter membrane anchored binding protein (EC 7.4.2.11) from Escherichia coli (strain K12) (see 6 papers)
METQ_ECOLI / P28635 D-methionine-binding lipoprotein MetQ from Escherichia coli (strain K12) (see paper)
TC 3.A.1.24.1 / P28635 MetQ, D-methionine-binding lipoprotein, component of The L- and D-methionine porter (also transports formyl-L-methionine and other methionine derivatives) (Zhang et al., 2003). The 3.7A structure of MetNI has been solved. An allosteric regulatory mechanism operates at the level of transport activity, so increased intracellular levels of the transported ligand stabilize an inward-facing, ATPase-inactive state of MetNI to inhibit further ligand translocation into the cell from Escherichia coli (see 4 papers)
metQ / GB|ABE05723.1 D-methionine-binding lipoprotein MetQ from Escherichia coli K12 (see 5 papers)
    43% identity, 80% coverage of query (142 bits)

4yahX / P28635 Crystal structure of the methionine binding protein, metq (see paper)
    44% identity, 75% coverage of query (142 bits)

4qhqA / B4EA88 The structure of a nutrient binding protein from burkholderia cenocepacia bound to methionine
    38% identity, 84% coverage of query (138 bits)

3tqwA / Q83F42 Structure of a abc transporter, periplasmic substrate-binding protein from coxiella burnetii (see paper)
    37% identity, 86% coverage of query (134 bits)

4ntlA / Q82Z74 Crystal structure of a lipoprotein, yaec family (ef3198) from enterococcus faecalis v583 at 1.80 a resolution
    38% identity, 74% coverage of query (127 bits)

NlpA / b3661 lipoprotein-28 from Escherichia coli K-12 substr. MG1655 (see 5 papers)
    39% identity, 75% coverage of query (122 bits)

P04846 Lipoprotein 28 from Escherichia coli (strain K12)
    39% identity, 75% coverage of query (122 bits)

3k2dA Crystal structure of immunogenic lipoprotein a from vibrio vulnificus (see paper)
    37% identity, 75% coverage of query (117 bits)

TC 3.A.1.24.4 / Q8NSN1 ABC-type transporter, periplasmic component (ABC-type transport system, secreted lipoprotein component), component of L-Methionine uptake porter, MetQNI from Corynebacterium glutamicum (see paper)
    33% identity, 84% coverage of query (115 bits)

1xs5A / O07950 The crystal structure of lipoprotein tp32 from treponema pallidum (see paper)
    33% identity, 73% coverage of query (110 bits)

6jf1A / A0A0H2UN92 Crystal structure of the substrate binding protein of a methionine transporter from streptococcus pneumoniae (see paper)
    32% identity, 80% coverage of query (105 bits)

TC 3.A.1.24.3 / Q8K8K9 AtmB, component of The methionine porter, AtmBDE from Streptococcus pyogenes serotype M3 (see 2 papers)
    32% identity, 78% coverage of query (91.7 bits)

Build an alignment

Build an alignment for AO353_11640 and 12 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory