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Searching for up to 100 curated homologs for AO353_25210 FitnessBrowser__pseudo3_N2E3:AO353_25210 (450 a.a.)

Found high-coverage hits (≥70%) to 9 curated proteins.

Removed hits that are identical to the query, leaving 8

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PfGW456L13_3648 D-serine ammonia-lyase (EC 4.3.1.18) from Pseudomonas fluorescens GW456-L13
    69% identity, 99% coverage of query (595 bits)

Q9HYN9 D-Serine ammonia-lyase (EC 4.3.1.18) from Pseudomonas aeruginosa (see paper)
    66% identity, 99% coverage of query (574 bits)

SDHD_ECOL6 / Q8FFF4 D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see 3 papers)
    63% identity, 98% coverage of query (546 bits)

DsdA / b2366 D-serine ammonia-lyase (EC 4.3.1.18) from Escherichia coli K-12 substr. MG1655 (see 41 papers)
dsdA / P00926 D-serine ammonia-lyase (EC 4.3.1.18) from Escherichia coli (strain K12) (see 36 papers)
SDHD_ECOLI / P00926 D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Escherichia coli (strain K12) (see 2 papers)
P00926 D-Serine ammonia-lyase (EC 4.3.1.18) from Escherichia coli (see 4 papers)
    63% identity, 98% coverage of query (545 bits)

3ss7X / P00926 Crystal structure of holo d-serine dehydratase from escherichia coli at 1.55 a resolution (see paper)
    64% identity, 97% coverage of query (544 bits)

Q8ZL08 D-Serine ammonia-lyase (EC 4.3.1.18) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
    64% identity, 96% coverage of query (534 bits)

3r0xA / Q8ZL08 Crystal structure of selenomethionine incorporated apo d-serine deaminase from salmonella tyhimurium (see paper)
    64% identity, 95% coverage of query (530 bits)

Q4A041 D-Serine ammonia-lyase (EC 4.3.1.18) from Staphylococcus saprophyticus (see paper)
    51% identity, 96% coverage of query (429 bits)

Build an alignment

Build an alignment for AO353_25210 and 8 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory