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Searching for up to 100 curated homologs for AO353_28370 FitnessBrowser__pseudo3_N2E3:AO353_28370 (284 a.a.)

Found high-coverage hits (≥70%) to 9 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

pmdD / Q93PS7 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Comamonas testosteroni (see paper)
LIGI_COMTE / Q93PS7 2-pyrone-4,6-dicarbaxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC 3.1.1.57 from Comamonas testosteroni (Pseudomonas testosteroni) (see 2 papers)
    32% identity, 93% coverage of query (119 bits)

D1MW98 2-pyrone-4,6-dicarboxylate lactonase (EC 3.1.1.57) from Comamonas sp. (see paper)
pmdD / BAI50713.1 2-pyrone-4,6-dicarboxylate hydrolase from Comamonas sp. E6 (see paper)
    31% identity, 93% coverage of query (118 bits)

proL / Q75T30 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Pseudomonas straminea (see 2 papers)
proL / GI|39573668 2-pyrone-4,6-dicarboxylate lactonase from Pseudomonas straminea (see paper)
proL / BAD04056.1 2-pyrone-4,6-dicarboxylate lactonase from Pseudomonas straminea (see paper)
    32% identity, 93% coverage of query (118 bits)

ligI / O87170 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Sphingobium sp. (strain NBRC 103272 / SYK-6) (see paper)
LIGI_SPHSK / O87170 2-pyrone-4,6-dicarboxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC 3.1.1.57 from Sphingobium sp. (strain NBRC 103272 / SYK-6) (see 3 papers)
O87170 2-pyrone-4,6-dicarboxylate lactonase (EC 3.1.1.57) from Sphingomonas paucimobilis (see paper)
ligI / GB|BAB88736.1 2-pyrone-4, 6-dicarboxylic acid hydrolase from Sphingomonas paucimobilis (see paper)
ligI / BAB88736.1 2-pyrone-4,6-dicarbaxylate hydrolase from Sphingomonas paucimobilis (see 5 papers)
    32% identity, 93% coverage of query (116 bits)

4di8A / O87170 Crystal structure of the d248a mutant of 2-pyrone-4,6-dicarboxylic acid hydrolase from sphingomonas paucimobilis complexed with substrate at ph 8.5 (see paper)
    32% identity, 93% coverage of query (113 bits)

SLH / A6XIG6 4-sulfomuconolactone hydrolase (EC 3.1.1.92) from Hydrogenophaga intermedia (see paper)
SLMH_HYDIT / A6XIG6 4-sulfomuconolactone hydrolase; 4-carboxymethylen-4-sulfo-but-2-en-olide hydrolases; EC 3.1.1.92 from Hydrogenophaga intermedia (see paper)
A6XIG6 4-sulfomuconolactone hydrolase (EC 3.1.1.92) from Hydrogenophaga intermedia (see paper)
GI|111414259 4-sulfomuconolactone hydrolase from Hydrogenophaga intermedia (see paper)
    30% identity, 93% coverage of query (113 bits)

Build an alignment

Build an alignment for AO353_28370 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

SLMH_RHIRD / A6XIG7 4-sulfomuconolactone hydrolase; 4-carboxymethylen-4-sulfo-but-2-en-olide hydrolases; EC 3.1.1.92 from Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter) (see paper)
A6XIG7 4-sulfomuconolactone hydrolase (EC 3.1.1.92) from Agrobacterium tumefaciens (see paper)
    29% identity, 93% coverage of query (101 bits)

proL / BAB21457.1 2-Pyrone-4,6-dicarboxylate lactonase, partial from Pseudomonas straminea (see 2 papers)
    33% identity, 72% coverage of query (101 bits)

gli / A9CEQ7 D-galactarolactone isomerase (EC 5.4.1.4) from Agrobacterium fabrum (strain C58 / ATCC 33970) (see 2 papers)
GLI_AGRFC / A9CEQ7 D-galactarolactone isomerase; GLI; Galactaro delta-lactone isomerase; EC 5.4.1.4 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see paper)
A9CEQ7 D-galactarolactone isomerase (EC 5.4.1.4) from Agrobacterium tumefaciens (see paper)
    22% identity, 79% coverage of query (66.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory