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Searching for up to 100 curated homologs for AO356_01095 FitnessBrowser__pseudo5_N2C3_1:AO356_01095 (352 a.a.)

Found high-coverage hits (≥70%) to 17 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Psest_3840 D-lactate/glycolate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri RCH2
    71% identity, 98% coverage of query (489 bits)

Gox / b4468 glycolate dehydrogenase, putative FAD-binding subunit (EC 1.1.99.14) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
glcE / P52073 glycolate dehydrogenase, putative FAD-binding subunit (EC 1.1.99.14) from Escherichia coli (strain K12) (see 3 papers)
GLCE_ECOLI / P52073 Glycolate oxidase subunit GlcE; Glycolate dehydrogenase subunit GlcE; EC 1.1.99.14 from Escherichia coli (strain K12) (see 4 papers)
glcE / RF|YP_026191.1 glycolate oxidase, subunit glcE from Escherichia coli K12 (see paper)
glcE / AAB02531.1 glycolate oxidase subunit from Escherichia coli (see paper)
    62% identity, 100% coverage of query (431 bits)

RR42_RS17310 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) from Cupriavidus basilensis FW507-4G11
    51% identity, 99% coverage of query (298 bits)

SMc00833 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) from Sinorhizobium meliloti 1021
    37% identity, 94% coverage of query (185 bits)

PGA1_c29710 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) from Phaeobacter inhibens BS107
    34% identity, 92% coverage of query (161 bits)

Build an alignment

Build an alignment for AO356_01095 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

8jdxA Crystal structure of mldhd in complex with 2-ketoisovaleric acid
    23% identity, 84% coverage of query (65.5 bits)

8jdpA Crystal structure of h405a mldhd in complex with d-2-hydroxyisovaleric acid
    23% identity, 84% coverage of query (63.9 bits)

8jdzA Crystal structure of mldhd in complex with 2-keto-3-methylvaleric acid
    23% identity, 84% coverage of query (63.5 bits)

8jdyA Crystal structure of mldhd in complex with 2-ketoisocaproic acid
    23% identity, 84% coverage of query (63.5 bits)

8jdbA / Q7TNG8 Crystal structure of h405a mldhd in complex with d-2-hydroxyoctanoic acid (see paper)
    23% identity, 84% coverage of query (63.2 bits)

8jdrA Crystal structure of h405a mldhd in complex with d-2-hydroxy-3-methyl- valeric acid
    23% identity, 84% coverage of query (63.2 bits)

8jdqA Crystal structure of h405a mldhd in complex with d-2-hydroxyisocaproic acid
    23% identity, 84% coverage of query (63.2 bits)

8jdoA Crystal structure of h405a mldhd in complex with d-2-hydroxyhexanoic acid
    23% identity, 84% coverage of query (63.2 bits)

8jdnA Crystal structure of h405a mldhd in complex with d-2-hydroxyvaleric acid
    23% identity, 84% coverage of query (63.2 bits)

8jdgA Crystal structure of h405a mldhd in complex with d-2-hydroxybutanoic acid
    23% identity, 84% coverage of query (63.2 bits)

8jdeA Crystal structure of mldhd in complex with d-lactate
    23% identity, 84% coverage of query (63.2 bits)

8jdvA Crystal structure of mldhd in complex with 2-ketohexanoic acid
    23% identity, 84% coverage of query (62.8 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory