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Searching for up to 100 curated homologs for AO356_01100 FitnessBrowser__pseudo5_N2C3_1:AO356_01100 (406 a.a.)

Found high-coverage hits (≥70%) to 9 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Psest_3839 D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri RCH2
    70% identity, 100% coverage of query (595 bits)

YghL / b4467 glycolate dehydrogenase, putative iron-sulfur subunit (EC 1.1.99.14) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
glcF / P52074 glycolate dehydrogenase, putative iron-sulfur subunit (EC 1.1.99.14) from Escherichia coli (strain K12) (see 4 papers)
GLCF_ECOLI / P52074 Glycolate oxidase iron-sulfur subunit; Glycolate dehydrogenase subunit GlcF; Glycolate oxidase subunit GlcF; EC 1.1.99.14 from Escherichia coli (strain K12) (see 4 papers)
glcF / RF|YP_026190.1 glycolate oxidase, iron-sulfur subunit from Escherichia coli K12 (see paper)
glcF / AAB02532.1 glycolate oxidase subunit, (Fe-S)protein from Escherichia coli (see paper)
    68% identity, 100% coverage of query (583 bits)

RR42_RS17315 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Cupriavidus basilensis FW507-4G11
    54% identity, 100% coverage of query (451 bits)

SMc00926 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Sinorhizobium meliloti 1021
    44% identity, 99% coverage of query (331 bits)

PGA1_c29700 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens BS107
    42% identity, 99% coverage of query (317 bits)

Build an alignment

Build an alignment for AO356_01100 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

DVU_3028 / Q726S8 quinone-dependent D-lactate dehydrogenase iron-sulfur subunit (EC 1.1.2.5) from Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough) (see 3 papers)
    23% identity, 96% coverage of query (108 bits)

DVU_3033 / Q726S3 quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough) (see 4 papers)
    23% identity, 95% coverage of query (91.3 bits)

GlpC / b2243 anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
glpC / P0A996 anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) from Escherichia coli (strain K12) (see 4 papers)
    23% identity, 95% coverage of query (64.7 bits)

TFRB_METTM / D9PUX5 Fumarate reductase (CoM/CoB) subunit B; Thiol:fumarate reductase subunit B; EC 1.3.4.1 from Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum) (see 2 papers)
    22% identity, 97% coverage of query (62.0 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory