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Searching for up to 100 curated homologs for AO356_04615 FitnessBrowser__pseudo5_N2C3_1:AO356_04615 (330 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 2.A.80.1.1 / Q9FA46 TctC aka STM2786, component of The tricarboxylate transporter, TctABC from Salmonella enterica (see paper)
    60% identity, 97% coverage of query (406 bits)

HP15_2661 Citrate uptake transporter, substrate-binding component TctC from Marinobacter adhaerens HP15
    38% identity, 90% coverage of query (196 bits)

Build an alignment

Build an alignment for AO356_04615 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

TC 2.A.80.1.4 / S5XTE7 Citrate uptake transporter, substrate binding protein, component of Pmf-dependent citrate uptake porter, TctABC from Corynebacterium glutamicum MB001
    28% identity, 89% coverage of query (115 bits)

Dshi_3123 Tricarboxylate transport protein TctC from Dinoroseobacter shibae DFL-12
    26% identity, 78% coverage of query (103 bits)

2dvzA / Q7W0A0 Structure of a periplasmic transporter (see paper)
    27% identity, 85% coverage of query (68.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory