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Searching for up to 100 curated homologs for AO356_23170 FitnessBrowser__pseudo5_N2C3_1:AO356_23170 (269 a.a.)

Found high-coverage hits (≥70%) to 9 curated proteins.

Removed hits that are identical to the query, leaving 8

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Pf6N2E2_514 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens FW300-N2E2
    98% identity, 100% coverage of query (545 bits)

AO353_21345 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens FW300-N2E3
    88% identity, 100% coverage of query (503 bits)

PS417_11860 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas simiae WCS417
    85% identity, 100% coverage of query (473 bits)

BPHYT_RS13925 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Burkholderia phytofirmans PsJN
    58% identity, 100% coverage of query (326 bits)

SMc00432 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Sinorhizobium meliloti 1021
    53% identity, 99% coverage of query (283 bits)

iolB / P42413 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Bacillus subtilis (strain 168) (see 2 papers)
IOLB_BACSU / P42413 5-deoxy-glucuronate isomerase; 5DG isomerase; EC 5.3.1.30 from Bacillus subtilis (strain 168) (see paper)
P42413 5-deoxy-glucuronate isomerase (EC 5.3.1.30) from Bacillus subtilis (see paper)
    50% identity, 94% coverage of query (255 bits)

BWI76_RS03075 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Klebsiella michiganensis M5al
    49% identity, 99% coverage of query (246 bits)

Build an alignment

Build an alignment for AO356_23170 and 7 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

PGA1_c07230 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Phaeobacter inhibens BS107
    23% identity, 90% coverage of query (69.7 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory