Sites on a Tree

 

Searching for up to 100 curated homologs for AZOBR_RS08900 FitnessBrowser__azobra:AZOBR_RS08900 (174 a.a.)

Found high-coverage hits (≥70%) to 24 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

4jxrB / Q92L60 Crystal structure of a gnat superfamily phosphinothricin acetyltransferase (pat) from sinorhizobium meliloti in complex with accoa
    54% identity, 98% coverage of query (181 bits)

5dwnA / A0A0H3AQB6 Crystal structure of phosphinothricin n-acetyltransferase from brucella ovis in complex with acetylcoa
    48% identity, 97% coverage of query (160 bits)

4jwpA / Q2YRK4 Crystal structure of ribosomal-protein-alanine n-acetyltransferase from brucella melitensis in complex with acetyl coa
    41% identity, 93% coverage of query (111 bits)

MnaT / b1448 L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
mnaT / P76112 L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli (strain K12) (see paper)
MNAT_ECOLI / P76112 L-amino acid N-acyltransferase MnaT; L-methionine N-acyltransferase; L-methionine sulfoximine/L-methionine sulfone N-acetyltransferase; L-phenylglycine N-acetyltransferase; EC 2.3.1.- from Escherichia coli (strain K12) (see paper)
    39% identity, 99% coverage of query (110 bits)

M1EYW6 phosphinothricin acetyltransferase (EC 2.3.1.183) from Rhodococcus sp. (see paper)
    37% identity, 94% coverage of query (109 bits)

MDDA_PSEAE / Q9HUU7 L-methionine sulfoximine/L-methionine sulfone acetyltransferase; Methionine derivative detoxifier A; MDDA; EC 2.3.1.- from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
Q9HUU7 phosphinothricin acetyltransferase (EC 2.3.1.183) from Pseudomonas aeruginosa (see paper)
    40% identity, 97% coverage of query (109 bits)

3dr8A / Q8ZPD3 Structure of ynca, a putative acetyltransferase from salmonella typhimurium with its cofactor acetyl-coa
    39% identity, 99% coverage of query (108 bits)

2j8mA / Q9HUU7 Structure of p. Aeruginosa acetyltransferase pa4866 (see paper)
    40% identity, 97% coverage of query (108 bits)

MDDA_PSEA7 / A6VCX3 L-methionine sulfoximine/L-methionine sulfone acetyltransferase; Methionine derivative detoxifier A; MDDA; EC 2.3.1.- from Pseudomonas aeruginosa (strain PA7) (see paper)
    40% identity, 97% coverage of query (108 bits)

MDDA_SALTY / Q8ZPD3 L-methionine sulfoximine/L-methionine sulfone acetyltransferase; L-amino acid N-acyltransferase; Methionine derivative detoxifier A; MDDA; EC 2.3.1.- from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    39% identity, 99% coverage of query (108 bits)

2j8rA Structure of p. Aeruginosa acetyltransferase pa4866 solved in complex with l-methionine sulfoximine
    40% identity, 97% coverage of query (108 bits)

5wphA / Q88LK7 Crystal structure of arsn, n-acetyltransferase with substrate ast from pseudomonas putida kt2440 (see paper)
    40% identity, 89% coverage of query (103 bits)

6m7gA Crystal structure of arsn, n-acetyltransferase with substrate phosphinothricin from pseudomonas putida kt2440
    40% identity, 89% coverage of query (103 bits)

PAT_STRHY / P16426 Phosphinothricin N-acetyltransferase; PPT N-acetyltransferase; Phosphinothricin-resistance protein; EC 2.3.1.183 from Streptomyces hygroscopicus (see paper)
P16426 phosphinothricin acetyltransferase (EC 2.3.1.183) from Streptomyces hygroscopicus (see 5 papers)
    34% identity, 91% coverage of query (99.8 bits)

5t7eD / P16426 Crystal structure of streptomyces hygroscopicus bialaphos resistance (bar) protein in complex with coenzyme a and l-phosphinothricin (see paper)
    34% identity, 91% coverage of query (99.8 bits)

5t7dA Crystal structure of streptomyces hygroscopicus bialaphos resistance (bar) protein in complex with acetyl coenzyme a
    34% identity, 91% coverage of query (99.8 bits)

4mbuA / A0A0H3JXG2 Crystal structure of n-acetyltransferase from staphylococcus aureus mu50 (see paper)
    34% identity, 93% coverage of query (98.6 bits)

pat / Q57146 demethyl-phosphinothricin N-acetyltransferase (EC 2.3.1.183) from Streptomyces viridochromogenes (strain DSM 40736 / JCM 4977 / BCRC 1201 / Tue 494) (see 4 papers)
PAT_STRVT / Q57146 Phosphinothricin N-acetyltransferase; PPT N-acetyltransferase; Phosphinothricin-resistance protein; EC 2.3.1.183 from Streptomyces viridochromogenes (strain DSM 40736 / JCM 4977 / BCRC 1201 / Tue 494) (see paper)
Q57146 phosphinothricin acetyltransferase (EC 2.3.1.183) from Streptomyces viridochromogenes (see paper)
    33% identity, 93% coverage of query (90.9 bits)

2jlmF / Q6FBS8 Structure of a putative acetyltransferase (aciad1637) from acinetobacter baylyi adp1 (see paper)
    35% identity, 82% coverage of query (90.9 bits)

pat / A0A0M3WP01 demethyl-phosphinothricin N-acetyltransferase (EC 2.3.1.183) from Kitasatospora phosalacinea (see 5 papers)
    33% identity, 97% coverage of query (89.7 bits)

Q9RV48 phosphinothricin acetyltransferase (EC 2.3.1.183) from Deinococcus radiodurans (see paper)
    35% identity, 91% coverage of query (81.6 bits)

Q5L2F2 phosphinothricin acetyltransferase (EC 2.3.1.183) from Geobacillus kaustophilus (see paper)
    32% identity, 93% coverage of query (77.0 bits)

PAT_STRCO / P21861 Phosphinothricin N-acetyltransferase; PPT N-acetyltransferase; Phosphinothricin-resistance protein; EC 2.3.1.183 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see paper)
    31% identity, 94% coverage of query (76.6 bits)

Build an alignment

Build an alignment for AZOBR_RS08900 and 23 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

Q5KVT1 phosphinothricin acetyltransferase (EC 2.3.1.183) from Geobacillus kaustophilus (see paper)
    28% identity, 83% coverage of query (50.4 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory