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Searching for up to 100 curated homologs for AZOBR_RS27535 FitnessBrowser__azobra:AZOBR_RS27535 (785 a.a.)

Found high-coverage hits (≥70%) to 24 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

SpeF / b0693 inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli K-12 substr. MG1655 (see 15 papers)
speF / P24169 inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli (strain K12) (see 14 papers)
DCOS_ECOLI / P24169 Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli (strain K12) (see 2 papers)
    46% identity, 88% coverage of query (602 bits)

A8G927 16S rRNA (adenine1408-N1)-methyltransferase (EC 2.1.1.180) from Streptoalloteichus tenebrarius (see paper)
    43% identity, 94% coverage of query (602 bits)

A4Q8H0 ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens (see paper)
    45% identity, 88% coverage of query (600 bits)

SpeC / b2965 constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
speC / P21169 constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli (strain K12) (see 14 papers)
P21169 ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli (see paper)
    45% identity, 89% coverage of query (598 bits)

Q5ZH57 ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni (see paper)
odc / CAG34069.1 ornithine decarboxylase from Oenococcus oeni (see 2 papers)
    45% identity, 83% coverage of query (588 bits)

H8ZI01 ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis (see paper)
    45% identity, 86% coverage of query (574 bits)

P43099 ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri 30a (see paper)
odci / AAA64830.1 ornithine decarboxylase from Lactobacillus sp (see paper)
    44% identity, 82% coverage of query (566 bits)

1ordA / P43099 Crystallographic structure of a plp-dependent ornithine decarboxylase from lactobacillus 30a to 3.1 angstroms resolution (see paper)
    44% identity, 82% coverage of query (565 bits)

1c4kA Ornithine decarboxylase mutant (gly121tyr)
    43% identity, 82% coverage of query (562 bits)

6q6iA / Q9I2S7 Lysine decarboxylase a from pseudomonas aeruginosa
    38% identity, 98% coverage of query (518 bits)

LDCA_PSEAE / Q9I2S7 Lysine decarboxylase LdcA; EC 4.1.1.18 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
    38% identity, 98% coverage of query (518 bits)

A0A1V3Y1D0 ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri (see paper)
    40% identity, 83% coverage of query (512 bits)

E8X9U7 arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
    33% identity, 94% coverage of query (445 bits)

AdiA / b4117 arginine decarboxylase, degradative (EC 4.1.1.19) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
adiA / P28629 arginine decarboxylase, degradative (EC 4.1.1.19) from Escherichia coli (strain K12) (see 8 papers)
ADIA_ECOLI / P28629 Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli (strain K12) (see 2 papers)
P28629 arginine decarboxylase (EC 4.1.1.19) from Escherichia coli (see 2 papers)
2vycA / P28629 Crystal structure of acid induced arginine decarboxylase from e. Coli (see paper)
adiA / GI|145339 biodegradative arginine decarboxylase; EC 4.1.1.19 from Escherichia coli K12 (see 6 papers)
    33% identity, 94% coverage of query (445 bits)

5xx1G / Q8Z1P1 Crystal structure of arginine decarboxylase (adia) from salmonella typhimurium (see paper)
    33% identity, 94% coverage of query (414 bits)

Q87KT6 lysine decarboxylase (EC 4.1.1.18) from Vibrio parahaemolyticus (see paper)
    32% identity, 95% coverage of query (404 bits)

A0A094XEM2 lysine decarboxylase (EC 4.1.1.18) from Klebsiella aerogenes (see paper)
    32% identity, 96% coverage of query (399 bits)

LdcI / b4131 lysine decarboxylase 1 (EC 4.1.1.18) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
cadA / P0A9H3 lysine decarboxylase 1 (EC 4.1.1.18) from Escherichia coli (strain K12) (see 64 papers)
LDCI_ECOLI / P0A9H3 Inducible lysine decarboxylase; LDCI; EC 4.1.1.18 from Escherichia coli (strain K12) (see 10 papers)
P0A9H3 lysine decarboxylase (EC 4.1.1.18) from Escherichia coli (see 8 papers)
cadA / RF|NP_418555 lysine decarboxylase, inducible; EC 4.1.1.18 from Escherichia coli K12 (see 18 papers)
    32% identity, 96% coverage of query (393 bits)

3n75A / P0A9H3 X-ray crystal structure of the escherichia coli inducible lysine decarboxylase ldci (see paper)
    32% identity, 96% coverage of query (392 bits)

6q7lA Inducible lysine decarboxylase
    32% identity, 96% coverage of query (392 bits)

A0A0H3FP92 lysine decarboxylase (EC 4.1.1.18) from Klebsiella aerogenes (see 2 papers)
    31% identity, 95% coverage of query (389 bits)

LdcC / b0186 lysine decarboxylase 2 (EC 4.1.1.18) from Escherichia coli K-12 substr. MG1655 (see 15 papers)
ldcC / P52095 lysine decarboxylase 2 (EC 4.1.1.18) from Escherichia coli (strain K12) (see 13 papers)
LDCC_ECOLI / P52095 Constitutive lysine decarboxylase; LDCC; EC 4.1.1.18 from Escherichia coli (strain K12) (see 3 papers)
P52095 lysine decarboxylase (EC 4.1.1.18) from Escherichia coli (see 4 papers)
ldcC / GB|BAA21656.1 lysine decarboxylase, constitutive; EC 4.1.1.18 from Escherichia coli K12 (see 5 papers)
    32% identity, 94% coverage of query (387 bits)

Q9Z4R7 lysine decarboxylase (EC 4.1.1.18) from Eikenella corrodens (see paper)
    33% identity, 94% coverage of query (386 bits)

Q038E5 ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei (see paper)
    35% identity, 81% coverage of query (385 bits)

Build an alignment

Build an alignment for AZOBR_RS27535 and 24 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory